DPOGS212340 | ||
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Transcript | DPOGS212340-TA | 231 bp |
Protein | DPOGS212340-PA | 76 aa |
Genomic position | DPSCF300019 - 332956-333447 | |
RNAseq coverage | 3714x (Rank: top 3%) |
Annotation | ||||
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Heliconius | HMEL005666 | 1e-38 | 92.11% |   |
Bombyx | BGIBMGA004650-TA | 4e-37 | 88.16% |   |
Drosophila | CG14235-PA | 3e-14 | 42.47% |   |
EBI UniRef50 | UniRef50_A8P4J4 | 9e-14 | 47.22% | Putative uncharacterized protein n=2 Tax=Dikarya RepID=A8P4J4_COPC7 |
NCBI RefSeq | XP_316509.4 | 2e-15 | 49.32% | AGAP006471-PB [Anopheles gambiae str. PEST] |
NCBI nr blastp | gi|385303150 | 2e-14 | 49.35% | cytochrome c oxidase subunit vib [Dekkera bruxellensis AWRI1499] |
NCBI nr blastx | gi|385303150 | 1e-16 | 49.35% | cytochrome c oxidase subunit vib [Dekkera bruxellensis AWRI1499] |
Group | ||||
---|---|---|---|---|
Gene Ontology | GO:0004129 | 1.3e-23 | cytochrome-c oxidase activity | |
GO:0005739 | 1.3e-23 | mitochondrion | ||
KEGG pathway | ppa:PAS_chr4_0422 | 3e-15 |   | |
  | K02267 (COX6B) | maps-> | Huntington's disease | |
  |   |   | Oxidative phosphorylation | |
  |   |   | Alzheimer's disease | |
  |   |   | Cardiac muscle contraction | |
  |   |   | Parkinson's disease | |
InterPro domain | [4-75] IPR003213 | 1.3e-23 | Cytochrome c oxidase, subunit VIb | |
Orthology group | MCL10782 |   | Multiple-copy universal gene |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS212340-TA
ATGTGTGACCAGGAGTTTAGAACATTACGTATCGACCCTCGGTATCCATTTCAGAATCAGACGAAGGCGTGCTACGACAACTACTGCGACTATTATAAATGCACCCGTCTTTTGGGCGATGTAGACGATTGCAAGATATTCAAAAGATACTTCCAGACTATCTGCCCCAACTTTTGGATCGAACACTGGGATGAACTCCGGGAGAAAGGGGCTTTCCCTGGACCCATTTAA
>DPOGS212340-PA
MCDQEFRTLRIDPRYPFQNQTKACYDNYCDYYKCTRLLGDVDDCKIFKRYFQTICPNFWIEHWDELREKGAFPGPI-