DPOGS213032 | ||
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Transcript | DPOGS213032-TA | 339 bp |
Protein | DPOGS213032-PA | 112 aa |
Genomic position | DPSCF300024 + 542914-570440 | |
RNAseq coverage | 16x (Rank: top 81%) |
Annotation | ||||
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Heliconius | HMEL009104 | 6e-11 | 50.82% |   |
Bombyx | % |   | ||
Drosophila | Rbp6-PB | 5e-09 | 73.33% |   |
EBI UniRef50 | % | |||
NCBI RefSeq | XP_002652598.1 | 3e-09 | 90.00% | predicted protein [Culex quinquefasciatus] |
NCBI nr blastp | gi|269997169 | 7e-08 | 90.00% | predicted protein [Culex quinquefasciatus] |
NCBI nr blastx | gi|269997169 | 5e-07 | 96.43% | predicted protein [Culex quinquefasciatus] |
Group | ||||
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Gene Ontology | GO:0000166 | 3.3e-06 | nucleotide binding | |
GO:0003676 | 6.9e-06 | nucleic acid binding | ||
KEGG pathway |   | |||
InterPro domain | [31-62] IPR012677 | 3.3e-06 | Nucleotide-binding, alpha-beta plait | |
[32-64] IPR000504 | 6.9e-06 | RNA recognition motif domain | ||
Orthology group | MCL34959 |   | Lepidoptera specific |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS213032-TA
ATGAAGGAAGTGAAACGTCTAGAAAATGTGTCGTTAGGTGATCAAAGCTTAATTGCATTGACCGCGCTTCGGCGACGGACATCCGGTGATCTAGGACGAGAAAGCCTTCGAGACTACTTTAACAAATTCGGAGAAATCACAGAAGTTATGGTTATGAAGGATCCTACAACGAGACGGTCGAGGTCGCTATGCAAACAAACACTGCCATTGCAAGTCTCGAGACAAGAAATAAGTTGTCAAGTGTCAAGGGCAGTAGGAAACTTTTTAGGTCGACACCTTATCGTAATCGTAAATCAAGTGGACATCGGCAAAGGCCGAGATGTAGCACCGGTGTCCTGA
>DPOGS213032-PA
MKEVKRLENVSLGDQSLIALTALRRRTSGDLGRESLRDYFNKFGEITEVMVMKDPTTRRSRSLCKQTLPLQVSRQEISCQVSRAVGNFLGRHLIVIVNQVDIGKGRDVAPVS-