DPOGS213078 | ||
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Transcript | DPOGS213078-TA | 417 bp |
Protein | DPOGS213078-PA | 138 aa |
Genomic position | DPSCF300016 - 369709-370281 | |
RNAseq coverage | 1x (Rank: top 94%) |
Annotation | ||||
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Heliconius | HMEL009770 | 5e-77 | 100.00% |   |
Bombyx | BGIBMGA007694-TA | 8e-33 | 100.00% |   |
Drosophila | MED22-PA | 1e-55 | 74.63% |   |
EBI UniRef50 | UniRef50_Q9V439 | 2e-53 | 74.63% | Mediator of RNA polymerase II transcription subunit 22 n=83 Tax=Eumetazoa RepID=MED22_DROME |
NCBI RefSeq | NP_001040371.1 | 1e-72 | 97.10% | surfeit 5 [Bombyx mori] |
NCBI nr blastp | gi|114051370 | 3e-71 | 97.10% | surfeit 5 [Bombyx mori] |
NCBI nr blastx | gi|114051370 | 1e-67 | 97.10% | surfeit 5 [Bombyx mori] |
Group | ||||
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Gene Ontology | GO:0006357 | 4.3e-81 | regulation of transcription from RNA polymerase II promoter | |
GO:0016592 | 4.3e-81 | mediator complex | ||
GO:0001104 | 4.3e-81 | RNA polymerase II transcription cofactor activity | ||
KEGG pathway |   | |||
InterPro domain | [3-138] IPR009332 | 4.3e-81 | Mediator complex, subunit Med22 | |
Orthology group | MCL11878 |   | Multiple-copy universal gene |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS213078-TA
ATGCATCGAAACTTACCACAAAACAAAGAAGCTTTATTAAAGTCTTATACAACTCGTCTTAAAGAAGATGTTAAAAGTATGTTGGAAAATTTTGAAGAAATAATAAAGCTGGCTAAAGGTGAAAATGAATCACAATTAAACAGGATGACACAAATAGAACAAGACACATTTGAAATGCAAGTGAGAGCTGCAAATATTGTTAGAGCTGGAGAGTCTCTGATGAAATTGGTGTCAGACATTAAGCAGTACTTAATATTAAACGATTTCCCATCCGTTAATGAAGCAATTACACAAAATTCAAAATTATTCCGAACGAAGCAACAGGAGTGCGACCAAAAACTGATGTCACTTCGAGACGACATTGCAGCTGATCTCTATGATTTGGAAGATGAATATTTCACCAGCATATATAAGTGA
>DPOGS213078-PA
MHRNLPQNKEALLKSYTTRLKEDVKSMLENFEEIIKLAKGENESQLNRMTQIEQDTFEMQVRAANIVRAGESLMKLVSDIKQYLILNDFPSVNEAITQNSKLFRTKQQECDQKLMSLRDDIAADLYDLEDEYFTSIYK-