DPOGS213120 | ||
---|---|---|
Transcript | DPOGS213120-TA | 390 bp |
Protein | DPOGS213120-PA | 129 aa |
Genomic position | DPSCF300016 + 368745-369209 | |
RNAseq coverage | 0x (Rank: top 99%) |
Annotation | ||||
---|---|---|---|---|
Heliconius | HMEL009771 | 8e-54 | 72.44% | |
Bombyx | BGIBMGA007881-TA | 1e-48 | 65.35% | |
Drosophila | CG3192-PB | 2e-22 | 47.24% | |
EBI UniRef50 | UniRef50_D6X4J3 | 1e-36 | 57.03% | NADH dehydrogenase (Ubiquinone) 1 beta subcomplex, 8 n=2 Tax=Endopterygota RepID=D6X4J3_TRICA |
NCBI RefSeq | XP_968949.1 | 2e-37 | 57.03% | PREDICTED: similar to NADH-ubiquinone oxidoreductase ashi subunit [Tribolium castaneum] |
NCBI nr blastp | gi|91091864 | 5e-36 | 57.03% | PREDICTED: similar to NADH-ubiquinone oxidoreductase ashi subunit [Tribolium castaneum] |
NCBI nr blastx | gi|91091864 | 3e-39 | 57.03% | PREDICTED: similar to NADH-ubiquinone oxidoreductase ashi subunit [Tribolium castaneum] |
Group | ||||
---|---|---|---|---|
Gene Ontology | GO:0003954 | 3.3e-22 | NADH dehydrogenase activity | |
GO:0005739 | 3.3e-22 | mitochondrion | ||
GO:0008137 | 3.3e-22 | NADH dehydrogenase (ubiquinone) activity | ||
KEGG pathway | tca:657394 | 6e-37 | ||
K03964 (NDUFB8) | maps-> | Huntington's disease | ||
Oxidative phosphorylation | ||||
Alzheimer's disease | ||||
Parkinson's disease | ||||
InterPro domain | [3-118] IPR008699 | 3.3e-22 | NADH:ubiquinone oxidoreductase, ASHI subunit | |
Orthology group | MCL11864 | Multiple-copy universal gene |
Genotypes for resequenced monarchs and outgroup Danaus species |
---|
>DPOGS213120-TA
ATGGCGGAGAGACAGGCTGCGGCAAAAAAATATGGTTTGAGTATTGAGGAATATCAACCATATCCAGAAGAAATGGGATATGGTGACTACCCAAAATTGCCTGATATTGGAACGGATTCCAAAGATCCCCACTATCCCTACGATTTACCTGACTTGAAGAGAAATTTTAATGAACCTTTTCATGTTGCATCTGAAATTATTGGTGAAGATCGATTCAACATAAGTGTAAAGCATAGGATTCCAATGTGGCAACAATGGACCTGGTTTTTGGGAGCCATGTTTGGGAGTTACATGCTGTATATGTATTTAGATAATTACAAAATTGGCAGACCAGTTGTCGCTAAGCAATACCCACAAGAAGGGCCACATTACATGTTCTGCCCTAAATGA
>DPOGS213120-PA
MAERQAAAKKYGLSIEEYQPYPEEMGYGDYPKLPDIGTDSKDPHYPYDLPDLKRNFNEPFHVASEIIGEDRFNISVKHRIPMWQQWTWFLGAMFGSYMLYMYLDNYKIGRPVVAKQYPQEGPHYMFCPK-