| DPOGS213373 | ||
|---|---|---|
| Transcript | DPOGS213373-TA | 531 bp |
| Protein | DPOGS213373-PA | 176 aa |
| Genomic position | DPSCF300109 + 116717-117316 | |
| RNAseq coverage | 2538x (Rank: top 5%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL016391 | 7e-100 | 96.59% | |
| Bombyx | BGIBMGA009118-TA | 2e-99 | 96.02% | |
| Drosophila | vih-PA | 8e-70 | 67.42% | |
| EBI UniRef50 | UniRef50_Q9VTY6 | 8e-68 | 67.42% | Ubiquitin-conjugating enzyme E2 C n=21 Tax=Eukaryota RepID=UBE2C_DROME |
| NCBI RefSeq | XP_001862070.1 | 9e-74 | 73.86% | ubiquitin-conjugating enzyme E2 C [Culex quinquefasciatus] |
| NCBI nr blastp | gi|170052104 | 1e-72 | 73.86% | ubiquitin-conjugating enzyme E2 C [Culex quinquefasciatus] |
| NCBI nr blastx | gi|170052104 | 5e-73 | 73.86% | ubiquitin-conjugating enzyme E2 C [Culex quinquefasciatus] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0016881 | 1.7e-45 | acid-amino acid ligase activity | |
| KEGG pathway | cqu:CpipJ_CPIJ011393 | 2e-73 | ||
| K06688 (UBE2C, UBC11) | maps-> | Ubiquitin mediated proteolysis | ||
| InterPro domain | [18-173] IPR016135 | 5.2e-56 | Ubiquitin-conjugating enzyme/RWD-like | |
| [34-167] IPR000608 | 1.7e-45 | Ubiquitin-conjugating enzyme, E2 | ||
| Orthology group | MCL13027 | Single-copy universal gene | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS213373-TA
ATGGCTCAAAATATCAACCCTCACTACGCATCGTCATCTAATCCCGCCAAACAGAGCGAGGATACGATAAAATTGAAAGACAATCATGCAGTTAGCAAACGATTGCAGAAGGAACTAATGGAGCTGATGCGATGCGCTGACAAGGGAATATCCGCTTTCCCAGAGAGCGAGAACCTTTTCAAATGGATAGGAACAATTAACGGTCCTCAAGACACGGTTTATTCTGGTCACAAATACAAACTATCCCTCGAATTCCCCAATTCATATCCCTATGCCCCGCCTGTAGTTAAATTCCTGACACCCTGTTTTCATCCGAACGTGGATACGTGTGGATTAATATGTCTAGATATCTTAAAAGACAAGTGGACGGCTCTCTACGACGTTCGCACGGTGCTGCTGTCTATCCAGAGTTTGCTGGCGGAGCCGAACACTCAAAGCCCTCTCAACCAGCAGGCCTCGTACCTGTGGCCTAACCAGCCCGCCTATAAAAAATATTTAGAAGAATTTTATAATAAACATAAAGATTCATAG
>DPOGS213373-PA
MAQNINPHYASSSNPAKQSEDTIKLKDNHAVSKRLQKELMELMRCADKGISAFPESENLFKWIGTINGPQDTVYSGHKYKLSLEFPNSYPYAPPVVKFLTPCFHPNVDTCGLICLDILKDKWTALYDVRTVLLSIQSLLAEPNTQSPLNQQASYLWPNQPAYKKYLEEFYNKHKDS-