| DPOGS213838 | ||
|---|---|---|
| Transcript | DPOGS213838-TA | 519 bp |
| Protein | DPOGS213838-PA | 172 aa |
| Genomic position | DPSCF300183 + 134428-135362 | |
| RNAseq coverage | 199x (Rank: top 47%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL014194 | 7e-65 | 67.66% | |
| Bombyx | BGIBMGA011592-TA | 1e-70 | 70.66% | |
| Drosophila | CG10214-PA | 7e-54 | 53.29% | |
| EBI UniRef50 | UniRef50_Q7PD30 | 1e-56 | 59.64% | AGAP012804-PA n=15 Tax=cellular organisms RepID=Q7PD30_ANOGA |
| NCBI RefSeq | XP_971552.1 | 4e-58 | 57.40% | PREDICTED: similar to AGAP012804-PA [Tribolium castaneum] |
| NCBI nr blastp | gi|348543638 | 9e-60 | 60.59% | PREDICTED: oligoribonuclease, mitochondrial-like [Oreochromis niloticus] |
| NCBI nr blastx | gi|348543638 | 4e-57 | 60.59% | PREDICTED: oligoribonuclease, mitochondrial-like [Oreochromis niloticus] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0003676 | 1.5e-36 | nucleic acid binding | |
| GO:0004527 | 1.4e-15 | exonuclease activity | ||
| GO:0005622 | 1.4e-15 | intracellular | ||
| KEGG pathway | ||||
| InterPro domain | [1-168] IPR012337 | 1.5e-36 | Ribonuclease H-like | |
| [1-157] IPR013520 | 5.4e-27 | Exonuclease, RNase T/DNA polymerase III | ||
| [1-167] IPR006055 | 1.4e-15 | Exonuclease | ||
| Orthology group | MCL11514 | Multiple-copy universal gene | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS213838-TA
ATGACCGGTCTCAATGTTGAAAAAGACCATATTCTTGAGATAGCTTGCCTTGTAACAGATGAACACTTAAATATTGTCAGCACAGGACCTAATATAATCATACATCAGGATGATGAAGTATTGAATAATATGAATCAATGGTGTGTTACTCAACATGGTGAGAGTGGATTGACGGAGGCTTGTCGAAAATCTCAAATAACATTAACCAAAGCAGAAAATGACATTTTAAATTTTGTCAAATCTCATGTACCTGAGAAATTGTGCCCTTTAGGAGGAAATAGTGTTTATATGGACAGACTATTCTTACAAAAATATATGCCCAAATTAAACAACTATTTGCACTATAGAATTATTGATGTGAGTACCATAAAGGAGTTAGCTAAGAGGTGGTTCCCGAAAGAGTATTCGAGGATACCGACAAAGAAGTTTGAACATAGATGTTTGAATGATATCAAAGAAAGCGTTGAGGAACTTAAGTATTATAGAAATAATATATTTAAGGTTAATGAACCATTATAA
>DPOGS213838-PA
MTGLNVEKDHILEIACLVTDEHLNIVSTGPNIIIHQDDEVLNNMNQWCVTQHGESGLTEACRKSQITLTKAENDILNFVKSHVPEKLCPLGGNSVYMDRLFLQKYMPKLNNYLHYRIIDVSTIKELAKRWFPKEYSRIPTKKFEHRCLNDIKESVEELKYYRNNIFKVNEPL-