| DPOGS213928 | ||
|---|---|---|
| Transcript | DPOGS213928-TA | 231 bp |
| Protein | DPOGS213928-PA | 76 aa |
| Genomic position | DPSCF300218 + 428475-429837 | |
| RNAseq coverage | 673x (Rank: top 19%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL006055 | 3e-38 | 98.68% | |
| Bombyx | BGIBMGA004573-TA | 9e-39 | 97.37% | |
| Drosophila | SmG-PA | 2e-32 | 76.32% | |
| EBI UniRef50 | UniRef50_Q9VXE0 | 4e-30 | 76.32% | Probable small nuclear ribonucleoprotein G n=13 Tax=Drosophila RepID=RUXG_DROME |
| NCBI RefSeq | NP_001040405.1 | 9e-37 | 96.05% | small nuclear ribonucleoprotein G [Bombyx mori] |
| NCBI nr blastp | gi|114050793 | 2e-35 | 96.05% | small nuclear ribonucleoprotein G [Bombyx mori] |
| NCBI nr blastx | gi|114050793 | 2e-34 | 96.05% | small nuclear ribonucleoprotein G [Bombyx mori] |
| Group | ||||
|---|---|---|---|---|
| KEGG pathway | nvi:100117418 | 3e-32 | ||
| K11099 (SNRPG, SMG) | maps-> | Spliceosome | ||
| InterPro domain | [7-72] IPR006649 | 8.4e-24 | Like-Sm ribonucleoprotein (LSM) domain, eukaryotic/archaea-type | |
| [8-70] IPR001163 | 2.5e-20 | Like-Sm ribonucleoprotein (LSM) domain | ||
| [5-74] IPR010920 | 1.2e-18 | Like-Sm ribonucleoprotein (LSM)-related domain | ||
| Orthology group | MCL12376 | Single-copy universal gene | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS213928-TA
ATGTCTAAGGCACATCCTCCAGAGTTGAAAAAGTTCATGGACAAGAAGCTGTCCATCAAACTAAATGCTGGTCGTGCTGTGACGGGCGTTCTTAGAGGTTTTGATCCTTTCATGAACTTGGTACTTGATGAATCAGTTGAGGAATGTAAGGACGGGCAGAGGAATAATATAGGGATGGTCGTAATCCGTGGAAACAGTATCATCATGCTGGAGTCTTTGGATAGAATATAG
>DPOGS213928-PA
MSKAHPPELKKFMDKKLSIKLNAGRAVTGVLRGFDPFMNLVLDESVEECKDGQRNNIGMVVIRGNSIIMLESLDRI-