DPOGS214364 | ||
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Transcript | DPOGS214364-TA | 495 bp |
Protein | DPOGS214364-PA | 164 aa |
Genomic position | DPSCF300020 + 716272-717439 | |
RNAseq coverage | 19056x (Rank: top 1%) |
Annotation | ||||
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Heliconius | HMEL006357 | 1e-85 | 93.29% | |
Bombyx | BGIBMGA003978-TA | 6e-84 | 92.07% | |
Drosophila | RpL12-PC | 2e-73 | 79.01% | |
EBI UniRef50 | UniRef50_Q4V5X9 | 1e-71 | 79.01% | IP07888p n=8 Tax=Eukaryota RepID=Q4V5X9_DROME |
NCBI RefSeq | NP_001037150.1 | 2e-82 | 92.07% | ribosomal protein L12 [Bombyx mori] |
NCBI nr blastp | gi|16566713 | 2e-84 | 95.73% | ribosomal protein L12 [Spodoptera frugiperda] |
NCBI nr blastx | gi|16566713 | 3e-82 | 95.73% | ribosomal protein L12 [Spodoptera frugiperda] |
Group | ||||
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Gene Ontology | GO:0005840 | 8e-117 | ribosome | |
GO:0006412 | 8e-117 | translation | ||
GO:0003735 | 8e-117 | structural constituent of ribosome | ||
KEGG pathway | tca:664430 | 1e-74 | ||
K02870 (RP-L12e, RPL12) | maps-> | Ribosome | ||
InterPro domain | [1-158] IPR000911 | 8e-117 | Ribosomal protein L11 | |
[1-80] IPR020784 | 5.8e-44 | Ribosomal protein L11, N-terminal | ||
[73-144] IPR020783 | 6.4e-19 | Ribosomal protein L11, C-terminal domain | ||
Orthology group | MCL12160 | Single-copy universal gene |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS214364-TA
ATGCCGCCTAAGTTTGATCCTAACGAAATTAAAATCGTTTGCTTGAGATGTGTTGGTGGAGAAGTGGGTGCTACATCATCTTTGGCTCCTAAAATTGGTCCACTTGGTCTGTCCCCTAAAAAGGTTGGTGATGACATCGCTAAGGCTACTAGCGAGTGGAAGGGTCTGAAGATCACAGTGCAGTTGATTGTACAGAACAGACAGGCTCAGATATCTGTAGTGCCGTCTGCCGCTGCCCTCATCATTAGAGCCTTGAAGGAACCTCCGCGTGACCGCAAGAAGCAAAAGAACATCAAACACAGTGGCAACATCACCCTGGAGGATGTCATTAGCATTGCTAAGACCATGAGACCACGATCTATGGCGAGGTATCTGTCTGGAACAGTCAAAGAAATCCTTGGAACTGCCCAATCAGTTGGCTGCACCGTAGAAGGAAGACCCCCTCACGACTTGATTGTTGATATCAATGAGGGTACACTTACCATTGATGAATAA
>DPOGS214364-PA
MPPKFDPNEIKIVCLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSEWKGLKITVQLIVQNRQAQISVVPSAAALIIRALKEPPRDRKKQKNIKHSGNITLEDVISIAKTMRPRSMARYLSGTVKEILGTAQSVGCTVEGRPPHDLIVDINEGTLTIDE-