| DPOGS214678 | ||
|---|---|---|
| Transcript | DPOGS214678-TA | 654 bp |
| Protein | DPOGS214678-PA | 217 aa |
| Genomic position | DPSCF300321 + 157438-160696 | |
| RNAseq coverage | 938x (Rank: top 14%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL007685 | 1e-94 | 96.43% | |
| Bombyx | BGIBMGA001950-TA | 5e-89 | 89.01% | |
| Drosophila | Pabp2-PA | 3e-66 | 62.56% | |
| EBI UniRef50 | UniRef50_F2DBX9 | 2e-64 | 61.19% | Predicted protein n=3 Tax=Hordeum vulgare subsp. vulgare RepID=F2DBX9_HORVD |
| NCBI RefSeq | NP_001037644.1 | 1e-100 | 86.24% | polyadenylate binding protein 2 [Bombyx mori] |
| NCBI nr blastp | gi|112983360 | 2e-99 | 86.24% | polyadenylate binding protein 2 [Bombyx mori] |
| NCBI nr blastx | gi|112983360 | 2e-110 | 88.07% | polyadenylate binding protein 2 [Bombyx mori] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0000166 | 1.2e-21 | nucleotide binding | |
| GO:0003676 | 7.5e-19 | nucleic acid binding | ||
| KEGG pathway | ||||
| InterPro domain | [71-175] IPR012677 | 1.2e-21 | Nucleotide-binding, alpha-beta plait | |
| [97-169] IPR000504 | 7.5e-19 | RNA recognition motif domain | ||
| Orthology group | MCL14476 | Single-copy universal gene | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS214678-TA
ATGGCAGATAATGACGATTATTTAGACTCGATTGACAACAACCATCTAGACGGAACCAACGGTTCATTAAACATGACCGACAACAGCCTAGGCGGTGATGAAGCTTCAGGTACAGACGTACCGGACCTGGCCGCGATTAAGGCCAGGGTTAGAGAAATGGAAGAGGAGGCAGAGAAACTTAAACAGATGCATACAGAGGTGGACAAACAGATGAGCTTAGGAAGCCCGCCGGGACTCACGAGTCCCCTAAACATGTCGCTTGAAGAAAAAATTGAGACTGACAATAGGTCAGTTTATATTGGCAATGTGGATTATGGTGCTACAGCTGAGGAGCTGGAGCAGCACTTCCATGGCTGTGGGTCTATTAATAGGGTGACAATATTATGTAATAAGTTTGATGGACATCCAAAAGGATTTGCTTATATTGAATTTGGAGACAAAGATAGCGTTCAGACCGCCATGGCAATGGACGAGTCACTGTTTAGAGGCAGGCAGATAAAGGTGATGCCGAAGCGTACCAACAAGCCAGGCCTGTCGACAACCAACCGTCCACCCCGCGGCGCGAGAGGTCGCGGTCGATCCTACCGCGGCGGGTTCACGCCGTACTTCTCCGGCTACCGGCCCATGCGCCGTGGCAGGTACTACCCATACTAA
>DPOGS214678-PA
MADNDDYLDSIDNNHLDGTNGSLNMTDNSLGGDEASGTDVPDLAAIKARVREMEEEAEKLKQMHTEVDKQMSLGSPPGLTSPLNMSLEEKIETDNRSVYIGNVDYGATAEELEQHFHGCGSINRVTILCNKFDGHPKGFAYIEFGDKDSVQTAMAMDESLFRGRQIKVMPKRTNKPGLSTTNRPPRGARGRGRSYRGGFTPYFSGYRPMRRGRYYPY-