| DPOGS214848 | ||
|---|---|---|
| Transcript | DPOGS214848-TA | 471 bp |
| Protein | DPOGS214848-PA | 156 aa |
| Genomic position | DPSCF300091 - 147533-148003 | |
| RNAseq coverage | 247x (Rank: top 42%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL015022 | 2e-80 | 84.62% | |
| Bombyx | BGIBMGA010016-TA | 2e-74 | 80.13% | |
| Drosophila | dod-PA | 3e-51 | 61.39% | |
| EBI UniRef50 | UniRef50_Q13526 | 4e-44 | 55.35% | Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 n=160 Tax=root RepID=PIN1_HUMAN |
| NCBI RefSeq | NP_001040206.1 | 2e-55 | 60.95% | rotamase Pin1 [Bombyx mori] |
| NCBI nr blastp | gi|114052054 | 4e-54 | 60.95% | rotamase Pin1 [Bombyx mori] |
| NCBI nr blastx | gi|114052054 | 3e-53 | 61.31% | rotamase Pin1 [Bombyx mori] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0016853 | 4e-28 | isomerase activity | |
| GO:0005515 | 1.5e-13 | protein binding | ||
| KEGG pathway | tca:655927 | 1e-54 | ||
| K09578 (PIN1) | maps-> | RIG-I-like receptor signaling pathway | ||
| InterPro domain | [52-154] IPR000297 | 4e-28 | Peptidyl-prolyl cis-trans isomerase, PpiC-type | |
| [5-43] IPR001202 | 1.5e-13 | WW/Rsp5/WWP | ||
| Orthology group | MCL11684 | Multiple-copy universal gene | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS214848-TA
ATGTCGAATGATACTGAGGCTCCGCTACCTGAAGGATGGGAGATGAGAACTAGTCGTTCCACTGGCATGACTTACTTCCTAAACATGTACACTAAGAAGTCTCAGTGGGAACGGCCTGAAGTTCCCGCTGAACCGGGTGAGGTGAGATGTAGTCACATCCTCGTCAAACATTCAGAGAGCCGACGCCCTTCATCTTGGAGGGAGGATCATATAAAACGGACCAAAGAAGAGGCATTGGATTTAATTAAGAATTACCGGAAGCAGATTGTGTCTAATGATGCTTCATTTGCCGATGTTGCTATGAAGTGTTCAGATTGTTCCTCTGCAAAGCGTGGAGGGGATTTGGGATTGTTTGGTCGTGGTCAAATGCAACAAGCTTTTGAAGAAGAAGCCTTTAAATTAAAGGTCGGACAGCTGAGCAAACCAATTGAAACCGAGTCTGGCTTCCATATTATACTACGAACTGTTTGA
>DPOGS214848-PA
MSNDTEAPLPEGWEMRTSRSTGMTYFLNMYTKKSQWERPEVPAEPGEVRCSHILVKHSESRRPSSWREDHIKRTKEEALDLIKNYRKQIVSNDASFADVAMKCSDCSSAKRGGDLGLFGRGQMQQAFEEEAFKLKVGQLSKPIETESGFHIILRTV-