| DPOGS214953 | ||
|---|---|---|
| Transcript | DPOGS214953-TA | 768 bp |
| Protein | DPOGS214953-PA | 255 aa |
| Genomic position | DPSCF300280 + 121271-122038 | |
| RNAseq coverage | 466x (Rank: top 27%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL022216 | 4e-32 | 44.37% | |
| Bombyx | BGIBMGA004850-TA | 9e-116 | 80.97% | |
| Drosophila | CG5823-PA | 1e-31 | 43.88% | |
| EBI UniRef50 | UniRef50_G8GE15 | 2e-113 | 80.97% | Ubiquitin-conjugating enzyme E2 J1-like protein n=13 Tax=Neoptera RepID=G8GE15_BOMMO |
| NCBI RefSeq | XP_393288.2 | 8e-82 | 62.65% | PREDICTED: similar to ubiquitin-conjugating enzyme E2, J1 [Apis mellifera] |
| NCBI nr blastp | gi|358031576 | 5e-113 | 80.97% | ubiquitin-conjugating enzyme E2 J1-like [Bombyx mori] |
| NCBI nr blastx | gi|358031576 | 4e-114 | 82.59% | ubiquitin-conjugating enzyme E2 J1-like [Bombyx mori] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0016881 | 2.5e-22 | acid-amino acid ligase activity | |
| KEGG pathway | ame:409794 | 2e-81 | ||
| K10578 (UBE2J1, NCUBE1, UBC6) | maps-> | Ubiquitin mediated proteolysis | ||
| Parkinson's disease | ||||
| Protein processing in endoplasmic reticulum | ||||
| InterPro domain | [11-157] IPR016135 | 4.5e-37 | Ubiquitin-conjugating enzyme/RWD-like | |
| [17-127] IPR000608 | 2.5e-22 | Ubiquitin-conjugating enzyme, E2 | ||
| Orthology group | MCL17348 | Patchy | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS214953-TA
ATGGTTGAAATGGGTGAGAAATATAATACTAAGTGTCCTGGTGTTAAAAGACTAATGAGAGAAGCCATGGAGTTAGCGGAAGCAACCGAAGAATATTGCGCCAGACCACTCGAAGACAACCTGTTTGAGTGGCACTTTACTGTTCGAGGACCTGTGGGAACTGATTTCGAGGGTGGTGTTTACCATGGCAGGATATTGTTACCAAAAGAATATCCTATGCAGCCCCCCCACATAATCTTGCTTACACCAAATGGAAGATTTGAAGTTAATAAAAAAATATGTTTATCAATTTCTGGACACCATCCAGAAACCTGGCAGCCATCCTGGTCAATAAGAACAGCTTTATTAGCTTTGATTGCTTTTATGCCTACTCCAGCAGAAGGAACTATTGGATCTTTAGATTATTCTCCTGCAGAACGCAAACTTCTTGCCAAAAAGTCTAACGCCTGGGTATGCTCTCAGTGTGGTGATATTACAGCATTACTTTCATCCACAGCCGCTAAACCACCAACAGAGGAAGAACAAACCGTGTTAAATCAAATAGCATTCAAGGGTGAAGACGAGCAAGCCAGGTCTACTTTACCAGAACCAGTCTTTGAGCCTCAAAATGTACCTCAATATGCAGAAAGAGTTCTGGAATCTTCTGACAACACAACTAGTTTTCTGGACCAACTAACTGAGATCTTGGTGGCTCTGCTGGTAGGAGTTATTGGTATATTCATTTACAGACGTTGGAATGCTCATATGCCGGTTGACCCTGAACTATAA
>DPOGS214953-PA
MVEMGEKYNTKCPGVKRLMREAMELAEATEEYCARPLEDNLFEWHFTVRGPVGTDFEGGVYHGRILLPKEYPMQPPHIILLTPNGRFEVNKKICLSISGHHPETWQPSWSIRTALLALIAFMPTPAEGTIGSLDYSPAERKLLAKKSNAWVCSQCGDITALLSSTAAKPPTEEEQTVLNQIAFKGEDEQARSTLPEPVFEPQNVPQYAERVLESSDNTTSFLDQLTEILVALLVGVIGIFIYRRWNAHMPVDPEL-