| DPOGS216154 | ||
|---|---|---|
| Transcript | DPOGS216154-TA | 312 bp |
| Protein | DPOGS216154-PA | 103 aa |
| Genomic position | DPSCF300155 - 407178-408952 | |
| RNAseq coverage | 18486x (Rank: top 1%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL016547 | 1e-40 | 91.57% | |
| Bombyx | BGIBMGA004231-TA | 9e-31 | 68.54% | |
| Drosophila | CG11015-PA | 3e-25 | 47.15% | |
| EBI UniRef50 | UniRef50_Q1HPX0 | 1e-43 | 72.27% | Cytochrome c oxidase polypeptide Vb n=2 Tax=Endopterygota RepID=Q1HPX0_BOMMO |
| NCBI RefSeq | NP_001106742.1 | 2e-44 | 72.27% | cytochrome c oxidase polypeptide Vb [Bombyx mori] |
| NCBI nr blastp | gi|164448660 | 5e-43 | 72.27% | cytochrome c oxidase polypeptide Vb [Bombyx mori] |
| NCBI nr blastx | gi|164448660 | 1e-42 | 72.27% | cytochrome c oxidase polypeptide Vb [Bombyx mori] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0005740 | 1.6e-23 | mitochondrial envelope | |
| GO:0004129 | 1.6e-23 | cytochrome-c oxidase activity | ||
| KEGG pathway | aga:AgaP_AGAP008724 | 4e-26 | ||
| K02265 (COX5B) | maps-> | Huntington's disease | ||
| Oxidative phosphorylation | ||||
| Alzheimer's disease | ||||
| Cardiac muscle contraction | ||||
| Parkinson's disease | ||||
| InterPro domain | [1-97] IPR002124 | 1.6e-23 | Cytochrome c oxidase, subunit Vb | |
| Orthology group | MCL10510 | Multiple-copy universal gene | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS216154-TA
ATGGCTTCGTTGTGTAGACAAATTATCCGTGCAAATGCTGTTAGGAGTGCGCTCCTTTCAACCGCTCGACGGGGATATGCTGACAAAATGATGCCTGACCCCCTCGAGCATGCCACTGGTCTTGAGAAAAAGGAACTGCTGGCAATGCAGTCTGGTAATGACGATCCTTTCAACATGAAAGTTCTCAAGAAAGCTGCTGGCACCCGTGACCAACCAACACTAGTACCCTCCTGCTTTGACGCTAGAATTGATCACCCACGTCGCTGTGAATGTGGACACTGGTACAAGCTTACCGAGAAGGCGCCCCTTTAA
>DPOGS216154-PA
MASLCRQIIRANAVRSALLSTARRGYADKMMPDPLEHATGLEKKELLAMQSGNDDPFNMKVLKKAAGTRDQPTLVPSCFDARIDHPRRCECGHWYKLTEKAPL-