| New model in OGS2.0 | DPOGS211226 |
|---|---|
| Genomic Position | scaffold93:- 12512-13297 |
| See gene structure | |
| CDS Length | 624 |
| Paired RNAseq reads | 455 |
| Single RNAseq reads | 1029 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA006641 (4e-21) |
| Best Drosophila hit | RabX6 (4e-77) |
| Best Human hit | ras-related protein Rab-6A isoform a (9e-19) |
| Best NR hit (blastp) | ras-related protein Rab7 [Bombyx mori] (7e-104) |
| Best NR hit (blastx) | ras-related protein Rab7 [Bombyx mori] (3e-96) |
| GeneOntology terms | GO:0003924 GTPase activity GO:0005525 GTP binding GO:0007264 small GTPase mediated signal transduction |
| InterPro families | IPR020851 Small GTPase IPR005225 Small GTP-binding protein IPR001806 Ras GTPase IPR003577 Ras small GTPase, Ras type IPR003579 Ras small GTPase, Rab type IPR003578 Small GTPase, Rho type IPR013753 Ras |
| Orthology group | MCL17520 |
Nucleotide sequence:
ATGGCTATTGTAAAAACTCCGGTACTCAAAGTGATTTTATGCGGCGAATATGGTGTGGGG
AAAAGCTCAATATTTCGACGATTTATTAACAATACATTTTTACCGAATTCTGATAGGAGG
TCTACTTTAGGATTAGATCATTTCGAAAAACTTTTCCATGTTGGGGACAAAGATGTCAAG
TTACAGCTATGGGACACCGGTGGCATGGAGAGAATAGCATCAGTTACTTCAAGTTATTAT
AAATATGCCGAGGCAGCTGTATTAGTTTTTTCTTTAGATAATGCCTCATCATTTCATGTA
CTCAGCCAACATCTACTAGATATAGTTACTTATGCTGAGAATGCCAAAATATTTTTATGT
GGTAATAAATCAGATTTAGAAGGATTGTGTCCTCAAGTAACAGATGCTGATATAGAGAAC
TTTTGTGAACAATGTCACAATTTGATAAGCAGTACATATAAGACATCATGCAAAAGCGGG
AAAGGCTTGGATGAGATGTTCTCGGATATAGCACATCAGCTGGTTGAGTCAAATAGATCC
CGGATTGAGCTACAGAGACTTGACCACAACAGCTTCAAAATAACCCATCCCGAACCCCCC
GACGAACCCCCATGTAGCTGTTGA
Protein sequence:
MAIVKTPVLKVILCGEYGVGKSSIFRRFINNTFLPNSDRRSTLGLDHFEKLFHVGDKDVK
LQLWDTGGMERIASVTSSYYKYAEAAVLVFSLDNASSFHVLSQHLLDIVTYAENAKIFLC
GNKSDLEGLCPQVTDADIENFCEQCHNLISSTYKTSCKSGKGLDEMFSDIAHQLVESNRS
RIELQRLDHNSFKITHPEPPDEPPCSC