New model in OGS2.0 | DPOGS200165  |
---|---|
Genomic Position | scaffold21567:+ 2315-3419 |
See gene structure | |
CDS Length | 621 |
Paired RNAseq reads   | 57 |
Single RNAseq reads   | 255 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA002917 (2e-76) |
Best Drosophila hit   | veli, isoform A (1e-68) |
Best Human hit | protein lin-7 homolog C (5e-61) |
Best NR hit (blastp)   | AGAP005858-PA [Anopheles gambiae str. PEST] (2e-77) |
Best NR hit (blastx)   | AGAP005858-PA [Anopheles gambiae str. PEST] (2e-70) |
GeneOntology terms    | GO:0005515 protein binding GO:0005886 plasma membrane GO:0005911 cell-cell junction GO:0005923 tight junction GO:0006887 exocytosis GO:0007269 neurotransmitter secretion GO:0014069 postsynaptic density GO:0015031 protein transport GO:0016323 basolateral plasma membrane GO:0019717 synaptosome GO:0030165 PDZ domain binding GO:0045202 synapse GO:0045211 postsynaptic membrane |
InterPro families    | IPR001478 PDZ/DHR/GLGF IPR004172 L27 IPR014775 L27, C-terminal |
Orthology group | MCL12859 |
Nucleotide sequence:
ATGACGAGCACTGCGGAACAGCTGACGTTAGCAAGAGACATAAAGAGAGCCATCGAGTTG
CTAGAAAAACTCCAGCAAAGTGGAGAAGTTCCTGCGACTAAACTGGCTGCACTTCAAAAA
GTGTTACAAAGTGATTTTTTAAATGCTGTGAGAGAAGTGTATGAACATGTTTACGAAACG
GTGGATATTCAGGGTTCGGCGGATATACGAGCATCGGCTACTGCCAAAGCTACCGTCGCT
GCGTTTGCTGCAGCAGAAGGTCACGCTCATCCCAGAGTTGTGGAGTTACCGAAAACCGAA
GAAGGCTTAGGTTTTAACGTCATGGGTGGCAAGGAACAAAATTCGCCAATTTATATATCC
AGAATCATACCTGGCGGTGTCGCTGACCGTCATGGAGGATTGAAAAGAGGTGACCAACTG
CTCTCAGTTAATGGAGTATCCGTAGAGGGAGAAAACCATGAAAAGGCTGTAGAACTGCTT
AAGCAGGCAGTGGGTTCTGTCAAACTAGTGGGAGAGGAACTTTATCTAACCCAGGCAATG
TTAAAGCTCCTCTCCCTAAAATGCGATGGACCCGGCACCTGCATGGTGAATCCATGGAAT
GCTGAGAAGTTTTGTCCCTAA
Protein sequence:
MTSTAEQLTLARDIKRAIELLEKLQQSGEVPATKLAALQKVLQSDFLNAVREVYEHVYET
VDIQGSADIRASATAKATVAAFAAAEGHAHPRVVELPKTEEGLGFNVMGGKEQNSPIYIS
RIIPGGVADRHGGLKRGDQLLSVNGVSVEGENHEKAVELLKQAVGSVKLVGEELYLTQAM
LKLLSLKCDGPGTCMVNPWNAEKFCP