| New model in OGS2.0 | DPOGS200165 |
|---|---|
| Genomic Position | scaffold21567:+ 2315-3419 |
| See gene structure | |
| CDS Length | 621 |
| Paired RNAseq reads | 57 |
| Single RNAseq reads | 255 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA002917 (2e-76) |
| Best Drosophila hit | veli, isoform A (1e-68) |
| Best Human hit | protein lin-7 homolog C (5e-61) |
| Best NR hit (blastp) | AGAP005858-PA [Anopheles gambiae str. PEST] (2e-77) |
| Best NR hit (blastx) | AGAP005858-PA [Anopheles gambiae str. PEST] (2e-70) |
| GeneOntology terms | GO:0005515 protein binding GO:0005886 plasma membrane GO:0005911 cell-cell junction GO:0005923 tight junction GO:0006887 exocytosis GO:0007269 neurotransmitter secretion GO:0014069 postsynaptic density GO:0015031 protein transport GO:0016323 basolateral plasma membrane GO:0019717 synaptosome GO:0030165 PDZ domain binding GO:0045202 synapse GO:0045211 postsynaptic membrane |
| InterPro families | IPR001478 PDZ/DHR/GLGF IPR004172 L27 IPR014775 L27, C-terminal |
| Orthology group | MCL12859 |
Nucleotide sequence:
ATGACGAGCACTGCGGAACAGCTGACGTTAGCAAGAGACATAAAGAGAGCCATCGAGTTG
CTAGAAAAACTCCAGCAAAGTGGAGAAGTTCCTGCGACTAAACTGGCTGCACTTCAAAAA
GTGTTACAAAGTGATTTTTTAAATGCTGTGAGAGAAGTGTATGAACATGTTTACGAAACG
GTGGATATTCAGGGTTCGGCGGATATACGAGCATCGGCTACTGCCAAAGCTACCGTCGCT
GCGTTTGCTGCAGCAGAAGGTCACGCTCATCCCAGAGTTGTGGAGTTACCGAAAACCGAA
GAAGGCTTAGGTTTTAACGTCATGGGTGGCAAGGAACAAAATTCGCCAATTTATATATCC
AGAATCATACCTGGCGGTGTCGCTGACCGTCATGGAGGATTGAAAAGAGGTGACCAACTG
CTCTCAGTTAATGGAGTATCCGTAGAGGGAGAAAACCATGAAAAGGCTGTAGAACTGCTT
AAGCAGGCAGTGGGTTCTGTCAAACTAGTGGGAGAGGAACTTTATCTAACCCAGGCAATG
TTAAAGCTCCTCTCCCTAAAATGCGATGGACCCGGCACCTGCATGGTGAATCCATGGAAT
GCTGAGAAGTTTTGTCCCTAA
Protein sequence:
MTSTAEQLTLARDIKRAIELLEKLQQSGEVPATKLAALQKVLQSDFLNAVREVYEHVYET
VDIQGSADIRASATAKATVAAFAAAEGHAHPRVVELPKTEEGLGFNVMGGKEQNSPIYIS
RIIPGGVADRHGGLKRGDQLLSVNGVSVEGENHEKAVELLKQAVGSVKLVGEELYLTQAM
LKLLSLKCDGPGTCMVNPWNAEKFCP