| New model in OGS2.0 | DPOGS212908 |
|---|---|
| Genomic Position | scaffold1590:+ 27772-28651 |
| See gene structure | |
| CDS Length | 240 |
| Paired RNAseq reads | 15 |
| Single RNAseq reads | 645 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA012045 (3e-10) |
| Best Drosophila hit | CG9344 (2e-36) |
| Best Human hit | U6 snRNA-associated Sm-like protein LSm6 (2e-33) |
| Best NR hit (blastp) | membrane-associated protein, putative [Pediculus humanus corporis] (2e-38) |
| Best NR hit (blastx) | membrane-associated protein, putative [Pediculus humanus corporis] (2e-37) |
| GeneOntology terms | GO:0030532 small nuclear ribonucleoprotein complex GO:0005681 spliceosomal complex GO:0005688 U6 snRNP GO:0000398 nuclear mRNA splicing, via spliceosome |
| InterPro families | IPR006649 Like-Sm ribonucleoprotein (LSM) domain, eukaryotic/archaea-type IPR001163 Like-Sm ribonucleoprotein (LSM) domain IPR010920 Like-Sm ribonucleoprotein (LSM)-related domain |
| Orthology group | MCL15615 |
Nucleotide sequence:
ATGAGTCGCAAGGAAGCTCTGTCATCATTTATCCAACAAATTCACGGGCGACCAGTTGTA
GTCAAATTAAATAGCGGTGTGGATTATCGAGGAGTTCTTGCTTGTTTGGACGGCTATATG
AACATAGCTTTAGAACAGACTGAAGAATATGTAAATGGACAACTCAAAAATAAATACGGA
GATGCATTTATAAGAGGCAACAATGTTTTATATATAAGTACACAGAAACGCAGAATATAA
Protein sequence:
MSRKEALSSFIQQIHGRPVVVKLNSGVDYRGVLACLDGYMNIALEQTEEYVNGQLKNKYG
DAFIRGNNVLYISTQKRRI