| New model in OGS2.0 | DPOGS202160 |
|---|---|
| Genomic Position | scaffold1548:+ 7665-9813 |
| See gene structure | |
| CDS Length | 951 |
| Paired RNAseq reads | 13218 |
| Single RNAseq reads | 42730 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA003309 (1e-147) |
| Best Drosophila hit | ribosomal protein LP0 (6e-130) |
| Best Human hit | 60S acidic ribosomal protein P0 (5e-103) |
| Best NR hit (blastp) | ribosomal protein P0 [Bombyx mori] (6e-156) |
| Best NR hit (blastx) | ribosomal protein P0 [Bombyx mori] (1e-149) |
| GeneOntology terms | GO:0003735 structural constituent of ribosome GO:0006412 translation GO:0022625 cytosolic large ribosomal subunit GO:0005840 ribosome GO:0005737 cytoplasm GO:0003906 DNA-(apurinic or apyrimidinic site) lyase activity GO:0005634 nucleus GO:0006281 DNA repair GO:0006414 translational elongation GO:0042254 ribosome biogenesis GO:0005811 lipid particle |
| InterPro families | IPR001790 Ribosomal protein L10/acidic P0 IPR001813 Ribosomal protein 60S |
| Orthology group | MCL11749 |
Nucleotide sequence:
ATGGGTAGGGAGGACAAGGCCTCATGGAAGACCAACTACTTCACTAAGATAATTCAATTG
TTAGACGAGTACCCAAAATGCTTCATCGTGGGTGCCGACAATGTGGGCTCGCAGCAAATG
CAGCAAATCCGTATCTCCCTCCGTGGGAGCAGCATTGTACTCATGGGCAAGAACACCATG
ATGCGTAAGGCCATCAAGGATCATTTGGAGACCAACCCAGCCCTTGAGAAGCTCCTGCCC
CACATCAAAGGCAATGTTGGCTTTGTGTTCACCCGCGGAGATCTTGTCGAGGTCCGTGAC
AAGCTTCTGGAGAACAAAGTGCGTGCCCCGGCTCGTCCAGGAGCTATTGCTCCTCTGGCT
GTGGTCATTCCAGCTCATAACACTGGTTTGGGTCCCGAGAAAACTGCCTTCTTCCAGGCT
CTCTCCATCCCCACCAAGATCTCCAAGGGTACTATTGAAATCATCAACGATGTCCACATC
CTGAAGCCCGGAGACAAAGTGGGAGCTTCTGAGGCAACTCTTCTCAACATGTTAAACATT
TCTCCCTTCTCATATGGTCTAGTTGTGAAACAGGTCTATGACTCTGGCACCATCTTTGCC
CCGGCTATCCTTGACATCAAGCCCGAGGACTTGCGTGCCAAGTTCCAAGAGGGAGTAGCC
AATGTTGCCGCCCTCTCTTTGGCTATTGGATACCCGACCGTGGCCTCTGCCCCTCACTCC
ATTGCCAACGGATTCAAGAACCTCCTGGCTATCGCTGCCGTCACCGAGGTTGAGTTCAAG
GAAGCCAACACCATCAAGGAGTTCATCAAGGACCCTAGCAAGTTTGTTGCTGCTGTTGCT
GCCCCGGCAGCGGCTGCTGCTCCTGCCGCAGCCAAGAAGGAAGAGGAGAAGAAGCCCGAG
AAGGAAGAATCCGAGAGCGATGACGACATGGGTTTCGGACTCTTTGACTAA
Protein sequence:
MGREDKASWKTNYFTKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTM
MRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVRAPARPGAIAPLA
VVIPAHNTGLGPEKTAFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNI
SPFSYGLVVKQVYDSGTIFAPAILDIKPEDLRAKFQEGVANVAALSLAIGYPTVASAPHS
IANGFKNLLAIAAVTEVEFKEANTIKEFIKDPSKFVAAVAAPAAAAAPAAAKKEEEKKPE
KEESESDDDMGFGLFD