| New model in OGS2.0 | DPOGS200914 |
|---|---|
| Genomic Position | scaffold5:+ 451683-453597 |
| See gene structure | |
| CDS Length | 627 |
| Paired RNAseq reads | 125 |
| Single RNAseq reads | 532 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA000682 (9e-08) |
| Best Drosophila hit | Rab21, isoform C (1e-57) |
| Best Human hit | ras-related protein Rab-21 (1e-73) |
| Best NR hit (blastp) | Ras-related small GTPase [Triatoma infestans] (6e-80) |
| Best NR hit (blastx) | Ras-related small GTPase [Triatoma infestans] (6e-77) |
| GeneOntology terms | GO:0005525 GTP binding GO:0007264 small GTPase mediated signal transduction GO:0015031 protein transport GO:0005575 cellular_component GO:0000166 nucleotide binding |
| InterPro families | IPR005225 Small GTP-binding protein IPR001806 Ras GTPase IPR013753 Ras IPR003577 Ras small GTPase, Ras type IPR003579 Ras small GTPase, Rab type IPR003578 Small GTPase, Rho type IPR002041 Ran GTPase IPR020851 Small GTPase |
| Orthology group | MCL16464 |
Nucleotide sequence:
ATGACCACAGTCCAAAGTGGTACACACAATTTTAAAGTAGTTTTGTTAGGAGAAGGCTGC
GTCGGAAAAACATCTTTATTACTGCGATATATTGAAGACAAATATAATGACAAACATCTT
ACGACGCTCCAAGCAACCTTTCTCAACAAGAAATTGAACATAAATGGAAAACGCATAAAC
CTCTCTATTTGGGACACAGCCGGACAGGAGAAATTTCATGCCCTTGGACCAATTTACTAT
CGGAACTCGAATGGCGCCATACTTGTTTATGATATAACTGACGAGGATTCTTTTGGAAAA
GTAAAGAATTGGGTTAAGGAGTTAAGAAAGATGCTCGGCTCCGACATTGTGTTGGTAATT
GCAGGCAATAAAATTGATTTGGAGCAGGACAGGACTGTGCCGTTGGAGGAAGCTGAGAGT
TATGCGGTAATGGTAGGTGCGAGGCATTTTAATACATCAGCTAAAATGAATCAAGGTGTT
GAGGAGTTATTCCTTGAACTGACGAGGGAGATGACGGAAAGATTTGAACAAAATTCTCAA
GCCGATGTGTCAAGGACGTCCAGGGTTCTGGTTGTCGAAGATGAAGCCCCACAGCAGTCT
TCTTGCTGCTCAGGAATTAGGAACTAA
Protein sequence:
MTTVQSGTHNFKVVLLGEGCVGKTSLLLRYIEDKYNDKHLTTLQATFLNKKLNINGKRIN
LSIWDTAGQEKFHALGPIYYRNSNGAILVYDITDEDSFGKVKNWVKELRKMLGSDIVLVI
AGNKIDLEQDRTVPLEEAESYAVMVGARHFNTSAKMNQGVEELFLELTREMTERFEQNSQ
ADVSRTSRVLVVEDEAPQQSSCCSGIRN