| New model in OGS2.0 | DPOGS213302 |
|---|---|
| Genomic Position | scaffold2561:+ 2054-3579 |
| See gene structure | |
| CDS Length | 942 |
| Paired RNAseq reads | 501 |
| Single RNAseq reads | 1671 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA002878 (2e-16) |
| Best Drosophila hit | CG2681 (9e-17) |
| Best Human hit | E3 ubiquitin-protein ligase SIAH1 isoform b (3e-15) |
| Best NR hit (blastp) | hypothetical protein TcasGA2_TC006740 [Tribolium castaneum] (2e-27) |
| Best NR hit (blastx) | hypothetical protein TcasGA2_TC006740 [Tribolium castaneum] (3e-27) |
| GeneOntology terms | GO:0004842 ubiquitin-protein ligase activity GO:0016567 protein ubiquitination GO:0008270 zinc ion binding GO:0006511 ubiquitin-dependent protein catabolic process GO:0007275 multicellular organismal development GO:0005634 nucleus GO:0005515 protein binding |
| InterPro families | IPR004162 Seven-in-absentia protein, sina IPR018121 Seven-in-absentia protein, TRAF-like domain IPR008974 TRAF-like IPR001841 Zinc finger, RING-type IPR013010 Zinc finger, SIAH-type IPR013083 Zinc finger, RING/FYVE/PHD-type IPR013323 Seven In Absentia Homolog-type |
| Orthology group | MCL18591 |
Nucleotide sequence:
ATGGCGAAAGCGAAGGTTAACCAGAAAATGGGACCAGTTGTTGAGTTGCCTGAATGTCCA
ATTTGCTTGGACACCATGTCAGCTCCAATATTCCAATGTCAATCAGGGCACAGTCTCTGC
AGCTCTTGTACTAAAGCGTTGATGCCTCCTATATGTCCATTGTGCCGTCAAGCAATGACT
CAAGTGAGAAATTGGCAGCTTGAGGATTTGTTATTAAAGGCTACTATGAACTGTCCAAAT
AGGATCATAGGTTGTGCTTATACAACTGTTGCATCAAATATGGAAAACCACATCAAAGAA
TGTATTTATCGAGAGATGATTTGCCCTCTTCATGTATTTGGCAGATGTTCCTGGTCAGGA
AAACTAAAGGAAATGTTAGATCACTTTAAAGAACACCATTCTCAGAATTTGATTATGACT
ATGGATCAGAAAGTGACCATTAATAATCTTAACATTAATGAAGATGATCGCTTTGTGTAC
ATTATGCCACAAGGTAAAATGATGTTCATAGTAACATTGAAAATTGATACAAAATTGAAA
TTAGCATTTTTTGCCGTACAACTTATAGCTTGTCAGAAAATTGCACAACAACATGTTTAT
GAATTAAGTATAACTAGTTTGCAAGACAAGGAAAGAAGAGTCAATTATTTTGATCACTGC
TTTAGTGACGCAACGGAAACGAGAGAGATATTGCAATCAGCAAAATGTTGTGTTATGTCT
CTAAGCATGCTGGGAAATTTCATTAACAAGAAATCATTATCATTCTCTTTGAATGTGCAA
AGACTGAGACCAAACTATCAAAGAGAACCAAATAAAAATATTCATCAAGTTAATCCAAAT
GTTGCTAAGAATCGACAAAATTTTAGAGGTAAAAGTCCCTCAGCTGTAACTCACGGTCCC
AATAGACCCAAAGGTCCATGGAAGAAACCTATTAATCAATAA
Protein sequence:
MAKAKVNQKMGPVVELPECPICLDTMSAPIFQCQSGHSLCSSCTKALMPPICPLCRQAMT
QVRNWQLEDLLLKATMNCPNRIIGCAYTTVASNMENHIKECIYREMICPLHVFGRCSWSG
KLKEMLDHFKEHHSQNLIMTMDQKVTINNLNINEDDRFVYIMPQGKMMFIVTLKIDTKLK
LAFFAVQLIACQKIAQQHVYELSITSLQDKERRVNYFDHCFSDATETREILQSAKCCVMS
LSMLGNFINKKSLSFSLNVQRLRPNYQREPNKNIHQVNPNVAKNRQNFRGKSPSAVTHGP
NRPKGPWKKPINQ