| New model in OGS2.0 | DPOGS215568 |
|---|---|
| Genomic Position | scaffold446:- 18173-19313 |
| See gene structure | |
| CDS Length | 825 |
| Paired RNAseq reads | 779 |
| Single RNAseq reads | 3015 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA000367 (5e-112) |
| Best Drosophila hit | CG8636 (1e-76) |
| Best Human hit | eukaryotic translation initiation factor 3 subunit G (1e-57) |
| Best NR hit (blastp) | eukaryotic translation initiation factor 3 subunit 4 [Bombyx mori] (2e-116) |
| Best NR hit (blastx) | eukaryotic translation initiation factor 3 subunit 4 [Bombyx mori] (2e-113) |
| GeneOntology terms | GO:0006413 translational initiation GO:0005852 eukaryotic translation initiation factor 3 complex GO:0003743 translation initiation factor activity GO:0003729 mRNA binding GO:0003676 nucleic acid binding GO:0000166 nucleotide binding GO:0008270 zinc ion binding GO:0007052 mitotic spindle organization GO:0000022 mitotic spindle elongation |
| InterPro families | IPR000504 RNA recognition motif domain IPR017334 Translation initiation factor 3, RNA-binding subunit IPR012677 Nucleotide-binding, alpha-beta plait |
| Orthology group | MCL10844 |
Nucleotide sequence:
ATGCCTGTTGTCGATGAAATCCAGTCTTCTTGGGCCGATGAAGTGGAAATTGATCAAGGG
GAGCTCCCACCACCTTCGGAAGTTGTTGAAAATGGATTAAAAATTGTCACTGAATATAAA
TACGATAATGATAACAAAAAAGTTAAGATTGTTCGTACATATAAGATAGAAAAACGTGTT
GTTTCAAAGAGTATTGCAAAACGTAAAACATGGAACAAATTCGGTGATTCTGCTAATGAC
AAACCTGGTCCTAATCCTGCCACTACTAATGTTTGTGAGGATGTATTCATGCAGTTTATA
ACAAGCAAAGAAGAAGCACAGAGACCAGATGAAGGTGATTTGGAAGCTCTGAAGGCAAGA
CCTACTAAAGTACTATTCAAGTGCCGTACATGCCAAGGAGAACATTGGACTTCAAGTTGT
CCATTCCAGCACACACAATTAGCACAATCCAAGGCAATGGAAGCTGCCAAAGCGGCTGAA
GCCAAAACCTCATCAACTAAGTATGTTGTACCTCATGCAAGAGAAGGTGCTTCTCATATG
AGCCGTGATCAACTAGGAAGAAGAGACGATGTTGCTGCTATTCGTATTTCTAATCTAAGT
AACTTTGCTGTTGAAGCTGATCTTGATGATCTTGTTAAACCCTTTGGACCAGTACATAAG
TTATATCTCGCTAAAGAAAAGAGTACTGGCCAATGCAAAGGTTTTGCTTATGTGCACTTC
AAATTCCGTGATGATGCAGCCAAAGCCATTGAGACTCTGAATGGATATGGTTATGATCAT
TTAATCTTGAATGTGGAATGGTCCAAACCGCCTCAGAACAACTAA
Protein sequence:
MPVVDEIQSSWADEVEIDQGELPPPSEVVENGLKIVTEYKYDNDNKKVKIVRTYKIEKRV
VSKSIAKRKTWNKFGDSANDKPGPNPATTNVCEDVFMQFITSKEEAQRPDEGDLEALKAR
PTKVLFKCRTCQGEHWTSSCPFQHTQLAQSKAMEAAKAAEAKTSSTKYVVPHAREGASHM
SRDQLGRRDDVAAIRISNLSNFAVEADLDDLVKPFGPVHKLYLAKEKSTGQCKGFAYVHF
KFRDDAAKAIETLNGYGYDHLILNVEWSKPPQNN