| New model in OGS2.0 | DPOGS211860 |
|---|---|
| Genomic Position | scaffold71:+ 213431-214337 |
| See gene structure | |
| CDS Length | 423 |
| Paired RNAseq reads | 717 |
| Single RNAseq reads | 3026 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA001232 (2e-58) |
| Best Drosophila hit | Roc1a, isoform A (2e-50) |
| Best Human hit | E3 ubiquitin-protein ligase RBX1 (2e-48) |
| Best NR hit (blastp) | ring box protein [Bombyx mori] (3e-57) |
| Best NR hit (blastx) | ring box protein [Bombyx mori] (7e-61) |
| GeneOntology terms | GO:0007224 smoothened signaling pathway GO:0008283 cell proliferation GO:0019005 SCF ubiquitin ligase complex GO:0006508 proteolysis GO:0016567 protein ubiquitination GO:0004842 ubiquitin-protein ligase activity GO:0042787 protein ubiquitination involved in ubiquitin-dependent protein catabolic process GO:0005737 cytoplasm GO:0005634 nucleus GO:0005515 protein binding GO:0008270 zinc ion binding GO:0019915 lipid storage |
| InterPro families | IPR013083 Zinc finger, RING/FYVE/PHD-type IPR001841 Zinc finger, RING-type |
| Orthology group | MCL15476 |
Nucleotide sequence:
ATGGCTACAGCAATGGACGTAGATGAAGAAGAAGTCGAAATGGCTTCGTCGAGCAGTGGC
AAAGGCGACAAAAAAAGATTCGAAGTTAAAAAGTGGAATGCAGTAGCGTTGTGGGCTTGG
GATATCGTGGTGGACAACTGTGCTATTTGCCGCAACCACATCATGGACCTGTGTATAGAG
TGTCAAGCTAATCAAGCGTCTGCTACTAGTGAAGAATGCACAGTGGCTTGGGGAGTTTGC
AATCATGCTTTTCATTTCCACTGCATCTCTCGTTGGCTAAAAACAAGACAAGTGTGTCCT
CTCGACAATAGAGAATGGGAATTCCAAAATCTGATGTGTTTCCCAGGTACGGACACTAGC
AGGTGTCAGCACGCGGAGCTTCCTTATGAAAGTAACAAGAAATTGAATGTCATGTCAGTT
TAA
Protein sequence:
MATAMDVDEEEVEMASSSSGKGDKKRFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIE
CQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWEFQNLMCFPGTDTS
RCQHAELPYESNKKLNVMSV