| New model in OGS2.0 | DPOGS203547 |
|---|---|
| Genomic Position | scaffold703:+ 26354-30850 |
| See gene structure | |
| CDS Length | 819 |
| Paired RNAseq reads | 1212 |
| Single RNAseq reads | 3307 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA000218 (7e-10) |
| Best Drosophila hit | nuclear factor Y-box C (7e-35) |
| Best Human hit | nuclear transcription factor Y subunit gamma isoform 2 (3e-44) |
| Best NR hit (blastp) | nuclear Y/CCAAT-box binding factor C subunit NF/YC [Bombyx mori] (1e-84) |
| Best NR hit (blastx) | nuclear Y/CCAAT-box binding factor C subunit NF/YC [Bombyx mori] (5e-58) |
| GeneOntology terms | GO:0003677 DNA binding GO:0003700 sequence-specific DNA binding transcription factor activity GO:0005515 protein binding GO:0005622 intracellular GO:0005634 nucleus GO:0006355 regulation of transcription, DNA-dependent GO:0016602 CCAAT-binding factor complex GO:0043565 sequence-specific DNA binding GO:0045893 positive regulation of transcription, DNA-dependent |
| InterPro families | IPR009072 Histone-fold IPR003958 Transcription factor CBF/NF-Y/archaeal histone |
| Orthology group | MCL17808 |
Nucleotide sequence:
ATGTCCGTGTGTTTCTTTGTGCCAGCCGACCAAGCCGGTACTTCGGCTGGTTCAGAGGAG
ACGGAGGTGGATGGGGCAGAGGACGTACCTCCTGAGAACATCCAGAGTACTCTCCAGGTG
TTCTGGAACAAGGTCAATGAGGATATGAAGAAGATTAACTCGGAGGATTTCAAAACTCAA
GTCCTGCCGCTCGCTCGCATAAAGAAGATCATGAAGCTGGATGAAGAGGTGAAGATGATA
TCGGCCGAGGCCCCGGTTTTGTTCGCGAAAGCTGCCGAGATATTCATACACGAACTGACG
TTACGAGCGTGGTCTCATACTGAAGACAATAAGAGGAGGACGCTACAGCGTAATGACATA
GCCATGGCTATATCTAAGTCTGATCAGTTCGACTTCCTCATAGACATCGTCCCCAGACAC
GAGGTGAAGCCGGCTCCAGCCAGGAGAGACGAGCCGAGGCATGAGACGGTACAACAGCCG
CATCAGACTCCGATAACACAACCACAATTTGTCATTCAGCCGACGGCGCAGATAGTACAA
CAGCAACAGCAATCCAGCAGCACATCATCACAGCCCGTGCTGCTGCAGCAGGTGATGACT
GGCTCCGGGGAAGTGCAGCCTTTACCGATCCAGTTGACCCAGGCCCAGCTGAACATGATT
CGGCTCCAGGTGCAGAACAACCCCAACCAGCCGATCATCATACAGGCGCAACCCCAACCG
CAGCAGTCGCCGCAAATCATACAGGTGTCGTCTCAAGCTCCACATCAGCCGCACCAAATA
TTCCTCACCCAAGTGGCGTCCGGTCAAGACGAGTCCTAG
Protein sequence:
MSVCFFVPADQAGTSAGSEETEVDGAEDVPPENIQSTLQVFWNKVNEDMKKINSEDFKTQ
VLPLARIKKIMKLDEEVKMISAEAPVLFAKAAEIFIHELTLRAWSHTEDNKRRTLQRNDI
AMAISKSDQFDFLIDIVPRHEVKPAPARRDEPRHETVQQPHQTPITQPQFVIQPTAQIVQ
QQQQSSSTSSQPVLLQQVMTGSGEVQPLPIQLTQAQLNMIRLQVQNNPNQPIIIQAQPQP
QQSPQIIQVSSQAPHQPHQIFLTQVASGQDES