| New model in OGS2.0 | DPOGS206478 |
|---|---|
| Genomic Position | scaffold890:- 9031-26313 |
| See gene structure | |
| CDS Length | 3108 |
| Paired RNAseq reads | 127 |
| Single RNAseq reads | 294 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA005365 (0.0) |
| Best Drosophila hit | CG32432 (7e-100) |
| Best Human hit | ND |
| Best NR hit (blastp) | PREDICTED: similar to CG32432 CG32432-PA [Tribolium castaneum] (0.0) |
| Best NR hit (blastx) | PREDICTED: similar to CG32432-PA [Apis mellifera] (0.0) |
| GeneOntology terms | GO:0005575 cellular_component GO:0003674 molecular_function GO:0008150 biological_process |
| InterPro families | IPR000859 CUB IPR002172 Low-density lipoprotein (LDL) receptor class A repeat |
| Orthology group | MCL17607 |
Nucleotide sequence:
ATGGATAAGTACTGTAATAGAGAAGATGACTGCGGAGATAAAAGCGATGAACCAAAATCG
TGTACACCTTGTAACAGAACATACATGGGAGATGTCGGCCGTACTTACGAACTGGAGGTT
CGTAGGCCGAGAGAGGATCATCTTCCATTTGTCTGTCATCTAAATTTTACTGCTAATGGC
GGCAACTATGGCGATATTATACAGCTTACATTCGACACTTTCACGGTGGGTAAATTTGTA
TCGTTTACTTCTGATGGATGTCCGGATGGACACATGACAATAGTTGAGAGAAGTTCATCA
CCACCGATGGGTCAATGGTGTGGCTCAGCATGGGGTTATACTGTATACTTTAGCGAATCA
GACTCTATAAATATGACTCTCCGTTTGGATAGACTGAGCCAGCAGGGTGTTGGGTACAAT
TTCGACTTCAAGTTGGCATACAAGTTTCTAAGACGAAGCGAAGCTAGATTGCGGTACGGT
AACGCGACTGTGGGGGCATGGAGGGGGGAACGAGTCTCTGGCACCTATTGCGACCGCATA
CTGAGCGACTGTGATCTACGCGCATGCCGCATCCAGTCACCAAACTTTCCTGGAGTATAT
CCACGTAATGCGACGTGTACATACCGCATTGAACACACAAAGATACCAGCAGATAAACAT
GTTCTTTTGGCCGTAAGACAAACAAATAGTCACAAAATACATATCAAAGATCAAATAGTC
AAATATGATAGAAGCCAACGAGTTTTAAAGATTTGGGACCAATGTAATGTCGTTCAGGAT
TATCTAACAGTTTGGGATGGACCTACAAGAGACTATCCGGTTCTAGTTAGACTTTGTGGA
GGAGACGCAGTTCCTGACATAGTTAGCAGAGGGCCTAATATGTTACTAGAGTTTCATACC
TCACCTTATGATAATCCTTTTCATCCAGTTCCGCTCAGTTATTTACCTGGTTTTGAGCTT
GAAGTTCAGGTGTTGTACGTGGACAGAGATTCCCATTCGTACGTGAGTTCAGATGGTCGT
TGTCGGTTTGTTTTACGCTCCTCTGACAAGACAAGCGGGGTGTTAAGAAATCCACGACAC
TCCTTGCCACCAAATACATCTTGTGTGTATTACTTTCAAGGTCGTCCAAACGAAATAGTA
TGGGTATCGTTTGTTAAGTACCACGCTGCGGGTTCGGAGCCGGCGGGATTCGATCAACAA
AAGGATTGCTCTTCACAACTCACTATTTGGGATGGTGCGGCACCTGATGCAGATCTTGAT
AGAAAGTTGGAAATGAGTGACAAGAAATCTCTTCTCGGTTCATTTTGTCGAGAGGAATCT
CCGCGTCTGTGTGACCATGCGCTTCTATCAAACGCTACGCGCGCCACCAGGCCTTGTGCT
CCCACAGAAAGCTACATCACAACAGGACCAGCGCTTACTATTTTGCAGGAGCTACGTCAA
GGTTCAGCATTATATCCTGTCTCTTTCGTCTTGCGATACGAATTCGTAGATGTGAGTGAG
CAAGGTCAACCATTAGTGGACTCTCAGTCAGCGTGTGATAGAGTTTTTAAGTCAGCACTC
ACATATTCTGGAAGATTTCAAGCTCCCCGAGCTATATTTTACTATGGGCGAGGTGGATCT
CAAAATTTGACTTGTATTTTAAGATTTGAAGCTAAGCATGGAGAAAGAATACAGTTAACG
TTTACAAACACATATTTTGGAAATAAAATTTGTAGTACTCATAAAGATTCCAAGACAAGC
CGATGGGTTTGTGATAGGCCAATTAAAAGAATAATAGGTGGGGAAGGTTTAGCTCAGATT
ATTATAACTGAATATCCTTGGGAAGGGATCCCTATACAAAGAGATTGTTTATGTACAAAT
CGCTCCGAACCTCTTAACGTTCACACGCTTACAGCTCCCGTCGTAGAAGTTAATTTTACT
GTGACTATGATGAACATAACTGAAGATTATGACGATTTTCAATTTGAAGGTGAATATAAA
TTTATTCCCACTGGCCCCGGAGACGAAAGTGTTTGTTCTACTGGTTGGGGTGATAGACGA
TTAAGAGGAAGCAGTGGGGAAATAAGATTGTATGACAACAGAGAAGCGTCTGTAACTCCA
GAAATAATGGGTGACAGAAATGTTATATCAGAAAGCGTCAGAGCAGAAGTTGCTTGTGTT
CATAGACCTTGGTTGATAGAACCTGGAGGGGATGATGTAACACCTTTACAGGGTAGATAT
CTATATATCAAAGTACCGGGATATGAAATAACGCCTACCTCACCATTTTGTCCTACACCA
AATCGACTATTTATATACGAAGCACGAGATACTTCAATTCACAGAGAAATTTGTCCTAAA
GATTCTAACACTTTAGATTTGTATTCGCCAGGATGGAAATCATCACAAACAACAATAGAA
TCATCATTAAAACCTCATGCTAAGAGCTACGTAATTGATTTTCTACAACACGAACAAACC
GATTACTCAATCAAATGGATAGAAGTTATGAAAAAGCCATCTATTGACCATGATCCAGGG
TCAAACATTTTGCCTTTATCGGTTAATTTAGATTGCCATCATAACTGCCCAGAGTTGAAT
GCCTGTATTCCTATTACATTATGGTGTGATGGCAGTCCTCATTGCCCTTCTGGTTACGAT
GAAGATGACTCAAACTGTTCTTTTAAGTTGTCCTTGCCGTCACCATATGTTGCGGCAGTG
GCCGGTATGGGACTTCTTATTTGTGCTATCGCAATTGGTTTATGTGCATGTAAACGACGA
AGAAAAAAAGATAAGGAGTTTAAGGCAAGACTCGACGACGCGCTTCCACCTGAAGAAAGA
CCTTATGATCGTTCAAAAAGTAATGGCGTTCCAGAAGCTAATCGTCAATACGCAACTGTA
CAAAAATATGCTACAATAGATAAATACAGTTTAAGTCAAAAATATAGTGCGGGGCTCAAT
GATGTTAGGTATTATGATGAAGTAGCTCAAAAAGATAAGCTAGCCGACACGAGGTATGCT
AGCTTAGGGCGCGCTGGTCGGTGTAATCGAATGGAAAATAATAGAGGCACTGGATCTAGA
AGAATGCCAGACGTAGGCTATCCAGATCTAAAAGACGGATTTTGTTGA
Protein sequence:
MDKYCNREDDCGDKSDEPKSCTPCNRTYMGDVGRTYELEVRRPREDHLPFVCHLNFTANG
GNYGDIIQLTFDTFTVGKFVSFTSDGCPDGHMTIVERSSSPPMGQWCGSAWGYTVYFSES
DSINMTLRLDRLSQQGVGYNFDFKLAYKFLRRSEARLRYGNATVGAWRGERVSGTYCDRI
LSDCDLRACRIQSPNFPGVYPRNATCTYRIEHTKIPADKHVLLAVRQTNSHKIHIKDQIV
KYDRSQRVLKIWDQCNVVQDYLTVWDGPTRDYPVLVRLCGGDAVPDIVSRGPNMLLEFHT
SPYDNPFHPVPLSYLPGFELEVQVLYVDRDSHSYVSSDGRCRFVLRSSDKTSGVLRNPRH
SLPPNTSCVYYFQGRPNEIVWVSFVKYHAAGSEPAGFDQQKDCSSQLTIWDGAAPDADLD
RKLEMSDKKSLLGSFCREESPRLCDHALLSNATRATRPCAPTESYITTGPALTILQELRQ
GSALYPVSFVLRYEFVDVSEQGQPLVDSQSACDRVFKSALTYSGRFQAPRAIFYYGRGGS
QNLTCILRFEAKHGERIQLTFTNTYFGNKICSTHKDSKTSRWVCDRPIKRIIGGEGLAQI
IITEYPWEGIPIQRDCLCTNRSEPLNVHTLTAPVVEVNFTVTMMNITEDYDDFQFEGEYK
FIPTGPGDESVCSTGWGDRRLRGSSGEIRLYDNREASVTPEIMGDRNVISESVRAEVACV
HRPWLIEPGGDDVTPLQGRYLYIKVPGYEITPTSPFCPTPNRLFIYEARDTSIHREICPK
DSNTLDLYSPGWKSSQTTIESSLKPHAKSYVIDFLQHEQTDYSIKWIEVMKKPSIDHDPG
SNILPLSVNLDCHHNCPELNACIPITLWCDGSPHCPSGYDEDDSNCSFKLSLPSPYVAAV
AGMGLLICAIAIGLCACKRRRKKDKEFKARLDDALPPEERPYDRSKSNGVPEANRQYATV
QKYATIDKYSLSQKYSAGLNDVRYYDEVAQKDKLADTRYASLGRAGRCNRMENNRGTGSR
RMPDVGYPDLKDGFC