| New model in OGS2.0 | DPOGS212385 |
|---|---|
| Genomic Position | scaffold219:+ 28444-33413 |
| See gene structure | |
| CDS Length | 1716 |
| Paired RNAseq reads | 480 |
| Single RNAseq reads | 1281 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA002895 (8e-102) |
| Best Drosophila hit | lethal (1) G0007, isoform A (0.0) |
| Best Human hit | pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 (1e-173) |
| Best NR hit (blastp) | PREDICTED: similar to pre-mRNA splicing factor ATP-dependent RNA helicase PRP16 [Tribolium castaneum] (0.0) |
| Best NR hit (blastx) | PREDICTED: similar to pre-mRNA splicing factor ATP-dependent RNA helicase PRP16 [Tribolium castaneum] (0.0) |
| GeneOntology terms | GO:0008026 ATP-dependent helicase activity GO:0004004 ATP-dependent RNA helicase activity GO:0000398 nuclear mRNA splicing, via spliceosome GO:0005681 spliceosomal complex GO:0003676 nucleic acid binding GO:0005524 ATP binding GO:0000381 regulation of alternative nuclear mRNA splicing, via spliceosome GO:0002121 inter-male aggressive behavior |
| InterPro families | IPR007502 Helicase-associated domain IPR011709 Domain of unknown function DUF1605 IPR001650 Helicase, C-terminal |
| Orthology group | MCL10048 |
Nucleotide sequence:
ATGGATACGTATGAGAAGCAATGTAAGATCCCAGAGGATATTTGTGCGACGGCCTCCAGA
CCGGACATATTTTTCTATTCACGATTTTTAAAGCGCGTTGTGATAATAGAGCTCACGGTA
CTTTGGGAAAACGACGTCCCCAAAGACCAATGCCATCAAGATAGGTTCCCCTTAAACCTA
CACCTGGGTCGCAAGTACCAGGCACTGTTGAAGCTCCTCTCCCTGCAACGCAGTGAACCC
GGCACCCGCACGGCGCTGCAGATCCATTTACAACCGGATGAAGGAGACATCTTGATTTTC
ATGCCAGGTCAAGAAGACATTGAAGTCACTTGCGAGGTCCTAACAGAACGTTTGGGTGAT
CTGGATAACGCGCCGCCACTCACCGTACTGCCGATATATTCGCAACTTCCAGCTGACCTG
CAAGCGAAGATATTCCAGCGTGCTCCTCCAGGGCAAAGAAAATGCATCGTGGCTACCAAT
ATAGCTGAGACGTCTCTGACTGTGGATGGCATCATGTACGTGATCGACTGTGGTTATTGT
AAACTGAAGGTCTACAATCCACGGATAGGCATGGACGCTCTACAGATCTACCCGGTGAGC
CAGGCGAACGCTCGCCAGCGCGCAGGTCGAGCGGGTCGTACAGGTCCCGGGCGGGCGTTC
TGCCTGTACACGGAGCGGCAGTTCAGCCAGGAGCTGCTGCCGGCTACCGTGCCGGAGATC
CAGCGCACCAACCTCGCCAACACCGTCCTGCTGCTCAAGTCGCTGGGGGTCGACGACCTG
CTCGCCTTCCACTTCATGGACCCGCCGCCGCAGGACACAATCCTGAACTCGATGTACCAA
CTGTGGATCCTGGGAGCGCTGGACGGCACGGGAGCCCTGACGCCTCTCGGGAGACAGATG
GCGGAGTTCCCCCTGGACCCCCCGCAATGTCACATGCTCATAGTCTCCGCTGAGATGGGT
TGCAGCGCTGAGATGCTCATCATAGTGTCGATGCTGTCGGTGCCGTCCGTGTTCTACCGG
CCCCAGGGTCGGGAGGAGGACGCCGACACGGCCAAGGAGAAGTTCCAAGTGGCGGAATCG
GACCACCTCACCTTACTCCACTTATATAACCAGTGGAAATCCAACAATTATTCGAGCGCG
TGGTGTACGGAACACTTCGTCCACGCGAAGGCGATGCGGAAGGTCCGCGAGGTCCGCCAG
CAGCTGAGGGACATCCTCACGCAGCAGAGACTGCCGCTGCTGTCGTGCGGCACGGACTGG
GACACTGTGCGGAAATGTATCTGCTCAGCGTACTTCCAACAAGCCGCTCGTCTGAAAGGC
ATCGGCGAGTACGTGAACTGTCGGACGGGTATGCCGTGTCACCTGCACCCTACCAGCGCC
CTGTTCGGAGCGGGCAGCGCGCCGGACTACGTGGTGTACCACGAGCTGATGATGACCTCG
CGGGAGTACATGCACTGCGTCACCGCCGTCGACGGCCGCTGGCTCGCCGAGTTGGGACCC
ATGTTCTTCTCGGTTAAAGAAACTGGCAAGTCCAATCGCGACAAACGCAAGGAGGCCGCG
GTCCATCTGCAAAGGATGGAAGAAGAGATGAAGATGGCGGAACAGAAGATGGCAGAAGAG
AAAAAGAAGAGGGATCAAGAGGTTCCCGTGAAACAGGAAGTGGCCACGCCCGGCCTGAAC
ACGCCGCGACGGACGCCGCATACGCTCGGCTTGTAG
Protein sequence:
MDTYEKQCKIPEDICATASRPDIFFYSRFLKRVVIIELTVLWENDVPKDQCHQDRFPLNL
HLGRKYQALLKLLSLQRSEPGTRTALQIHLQPDEGDILIFMPGQEDIEVTCEVLTERLGD
LDNAPPLTVLPIYSQLPADLQAKIFQRAPPGQRKCIVATNIAETSLTVDGIMYVIDCGYC
KLKVYNPRIGMDALQIYPVSQANARQRAGRAGRTGPGRAFCLYTERQFSQELLPATVPEI
QRTNLANTVLLLKSLGVDDLLAFHFMDPPPQDTILNSMYQLWILGALDGTGALTPLGRQM
AEFPLDPPQCHMLIVSAEMGCSAEMLIIVSMLSVPSVFYRPQGREEDADTAKEKFQVAES
DHLTLLHLYNQWKSNNYSSAWCTEHFVHAKAMRKVREVRQQLRDILTQQRLPLLSCGTDW
DTVRKCICSAYFQQAARLKGIGEYVNCRTGMPCHLHPTSALFGAGSAPDYVVYHELMMTS
REYMHCVTAVDGRWLAELGPMFFSVKETGKSNRDKRKEAAVHLQRMEEEMKMAEQKMAEE
KKKRDQEVPVKQEVATPGLNTPRRTPHTLGL