New model in OGS2.0 | DPOGS215398 DPOGS215396  |
---|---|
Genomic Position | scaffold10735:+ 1490-4645 |
See gene structure | |
CDS Length | 921 |
Paired RNAseq reads   | 0 |
Single RNAseq reads   | 2 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA012431 (1e-96) |
Best Drosophila hit   | CG10026, isoform C (1e-26) |
Best Human hit | clavesin-1 (5e-17) |
Best NR hit (blastp)   | PREDICTED: similar to CRAL/TRIO domain-containing protein [Nasonia vitripennis] (6e-45) |
Best NR hit (blastx)   | PREDICTED: similar to CRAL/TRIO domain-containing protein [Nasonia vitripennis] (7e-38) |
GeneOntology terms    | GO:0008431 vitamin E binding GO:0016918 retinal binding GO:0006810 transport GO:0005622 intracellular GO:0005215 transporter activity |
InterPro families    | IPR001251 Cellular retinaldehyde-binding/triple function, C-terminal IPR011074 Phosphatidylinositol transfer protein-like, N-terminal IPR001071 Cellular retinaldehyde binding/alpha-tocopherol transport |
Orthology group | MCL22685 |
Nucleotide sequence:
ATGCCATTCCAAGAAATAGCCTTCCGCGCGGAACTTGACCGCCATGAGGATCCAGAGTTC
GAGTACCAGGCGAGCATACTCTGTGAGGAGGACGCCGCGGCGCGCGCCGACCGCGTACAG
CTACTGAGGAATATGATTTATGGTTGTGTTAATGAGCGTGGTGAGTGTGTCCCACCTCGT
ATGGACGACGCGTTCTTGTTGAGATTCCTCCGCGCTCGTCGCTCCATACCCGCGCGCGCG
CACCGCCTCATGGTTCGTTATTGTAAATTCCGTGAGCAGCATCCTCATCTGTGGAAAAAC
GTCTATTGGTACAGCTTGTCGAAGCTGGGTGAAACCTTCGAGGGAGTTCTCTTTGACAGA
CCGGATGTCGGAAGACTTATTATCTGCCGTTTAGGTCAATGGAACCCGGACATATACCCA
GCTGACGATCTCATTCGCGGTTGTCTCTTGTCCCTGGAGATAGGCATCATGCAACCGAAG
CTCCAGGTTCTAGGCGGAACAGCTATAGTAGACTGCGAGGGGATCACCATGAAGCATATG
AGACAGTTGTCACCATCGATTGCTGTTCAAGCTATGAACATCATGGGGAATATAGGACAC
GTTCATGATAAACCTCTGTTCCAGTTCTCGTTTCCTCTCCACCAACGCGGTGTTCACATC
GTGAACTGCTCGCGGTGGTTCGAGAAACTGTTCCATTTGTTGAAACGTTTCGCTCCTGCT
GACGAGTTGTGGAGGAAGGTCTACTTCCATGGATACGAGTATACATCTTTACATAGGTAC
ATCGACCCCGAGTGCCTCCCAAAGAGATACGGCGGCCACCGCGAGTCCGTCTCGGTTAGA
GATTGGCTCACAAAAATAAAACAGTATAAGAACAAACAGTTCGACGACGACATCAGCTGT
TTGGGATATGCCATAGATTAA
Protein sequence:
MPFQEIAFRAELDRHEDPEFEYQASILCEEDAAARADRVQLLRNMIYGCVNERGECVPPR
MDDAFLLRFLRARRSIPARAHRLMVRYCKFREQHPHLWKNVYWYSLSKLGETFEGVLFDR
PDVGRLIICRLGQWNPDIYPADDLIRGCLLSLEIGIMQPKLQVLGGTAIVDCEGITMKHM
RQLSPSIAVQAMNIMGNIGHVHDKPLFQFSFPLHQRGVHIVNCSRWFEKLFHLLKRFAPA
DELWRKVYFHGYEYTSLHRYIDPECLPKRYGGHRESVSVRDWLTKIKQYKNKQFDDDISC
LGYAID