| New model in OGS2.0 | DPOGS204191 |
|---|---|
| Genomic Position | scaffold119:+ 16377-19036 |
| See gene structure | |
| CDS Length | 609 |
| Paired RNAseq reads | 1126 |
| Single RNAseq reads | 4266 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA005115 (7e-100) |
| Best Drosophila hit | Rab-protein 1 (1e-92) |
| Best Human hit | ras-related protein Rab-1A isoform 1 (2e-87) |
| Best NR hit (blastp) | small GTP-binding protein [Bombyx mori] (5e-108) |
| Best NR hit (blastx) | small GTP-binding protein [Bombyx mori] (8e-100) |
| GeneOntology terms | GO:0003924 GTPase activity GO:0006888 ER to Golgi vesicle-mediated transport GO:0008360 regulation of cell shape GO:0007015 actin filament organization GO:0007155 cell adhesion GO:0007264 small GTPase mediated signal transduction GO:0005525 GTP binding GO:0005811 lipid particle GO:0050774 negative regulation of dendrite morphogenesis GO:0009306 protein secretion |
| InterPro families | IPR013753 Ras IPR005225 Small GTP-binding protein IPR001806 Ras GTPase IPR006688 ADP-ribosylation factor IPR003577 Ras small GTPase, Ras type IPR003579 Ras small GTPase, Rab type IPR003578 Small GTPase, Rho type IPR002041 Ran GTPase IPR020851 Small GTPase |
| Orthology group | MCL15623 |
Nucleotide sequence:
ATGAATCCAGAATACGACTACTTGTTTAAACTACTCTTGATTGGAGACTCAGGTGTCGGC
AAGTCCTGTCTGTTGCTTCGATTTGCTGATGATACGTATACAGAGAGCTACATCAGTACT
ATTGGTGTGGACTTTAAAATTAGGACTTTAGATTTAGATGGAAAGACAATAAAGTTACAA
ATATGGGACACGGCAGGACAAGAGAGATTCAGAACAATCACATCGTCCTACTACAGAGGG
GCACATGGAATCATTATTGTATATGACTGTACAGATCAGGATTCCTTCAGCAATGTGAAA
CAGTGGTTGGAAGAGATTGACCGTTATGCCTGTGACAGTGTCAACAAGCTACTGGTCGGC
AACAAATGTGACCTCACCACCAAGAAAGCGGTTGATTATACCACTGCTAAGCAATATGCA
GAGCAGTTGGGTATCCCGTTCCTGGAGACATCGGCCAAGAACTCAACGAATGTTGAACAA
GCGTTCATGACTATGGCCGCTGAGATAAAGGCTCGTGTTGGCCCGCCTTCAGCCGGCGCG
CCCGCCGCCGCCGCTGTCAAGATAGATCAAGGACGTCCCATCGACACTAACAGGACCTCC
TGTTGCTGA
Protein sequence:
MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTLDLDGKTIKLQ
IWDTAGQERFRTITSSYYRGAHGIIIVYDCTDQDSFSNVKQWLEEIDRYACDSVNKLLVG
NKCDLTTKKAVDYTTAKQYAEQLGIPFLETSAKNSTNVEQAFMTMAAEIKARVGPPSAGA
PAAAAVKIDQGRPIDTNRTSCC