| New model in OGS2.0 | DPOGS205111 |
|---|---|
| Genomic Position | scaffold817:+ 8286-10680 |
| See gene structure | |
| CDS Length | 876 |
| Paired RNAseq reads | 207 |
| Single RNAseq reads | 531 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA005878 (2e-116) |
| Best Drosophila hit | transcription factor IIEbeta, isoform A (4e-99) |
| Best Human hit | transcription initiation factor IIE subunit beta (9e-73) |
| Best NR hit (blastp) | transcription initiation factor IIE subunit beta [Culex quinquefasciatus] (5e-123) |
| Best NR hit (blastx) | AGAP005382-PA [Anopheles gambiae str. PEST] (1e-106) |
| GeneOntology terms | GO:0016251 general RNA polymerase II transcription factor activity GO:0005673 transcription factor TFIIE complex GO:0006367 transcription initiation from RNA polymerase II promoter |
| InterPro families | IPR016656 Transcription initiation factor TFIIE, beta subunit IPR003166 Transcription factor TFIIE beta subunit, DNA-binding domain IPR011991 Winged helix-turn-helix transcription repressor DNA-binding |
| Orthology group | MCL14484 |
Nucleotide sequence:
ATGGATCCAGCACTTCTGAGAGAGCGGGAGGCGTTCAGGAAAAAGGCACTTGCAACGCCG
AGTGTTGAGAAAAAGAAGAGAGATGATTCCTTTAAAGATGATAGCAAGAAGAAATCGAAA
TCATCAAGCTCAGCAAATGCTGCCCCAAAAATTGATGCCACCAATTACAAGACGATGGCT
GGCAGTTCCTCCTATCGTTTTGGTGTGTTGGCTCGCATCGTCAGACACATGAAGTCCAGA
CACCAAGAAGGGGATGACCATCCGCTGTCGATTGATGAAATTTTAGATGAAACAAATCAG
TTAGATGTTGGAAGTAAAATTAAACAGTGGCTTCAGACTGAAGCGTTACAGAATAATCCT
AAAATAGAGCACACATTTGACGGAAAGTTTATATTTAAACCAGTTTATAAAATTAAGGAC
AAGAAATCATTACTGAGATTACTGAAGCAACATGATTTAAAAGGTCTAGGGGGGATTTTT
CTAGAGGACGTCCAAGAATCATTGCCGCACTGCGACAGAGCATTGAAAAGTTTAGCGCAA
GAAATATTATACATAACAAGACCCTCAGATAAAAAGAAAATTTTGTTTTATAATGACAAA
ACCGCCACTTTAGATGTTGACGAAGAGTTTGTGAAATTATGGCGAGCCACGGCCGTAGAT
GCCATGGACGACGCCAAGATAGAGGAATACTTGGAGAAGCAAGGCATCAAATCAATGCAG
GACCACGGCCCAAGGAAACCTGTGGTGCCCAAACGGAAGAAGGTCACCCAGAAGAGGAGG
CAGTTCAAGAAACCCAGGGACAATGAACATCTGGCTGACGTACTCGAAACGTACGAAGAT
AATACGCTGACACAAAAAGGTGTCAGTATTAAATGA
Protein sequence:
MDPALLREREAFRKKALATPSVEKKKRDDSFKDDSKKKSKSSSSANAAPKIDATNYKTMA
GSSSYRFGVLARIVRHMKSRHQEGDDHPLSIDEILDETNQLDVGSKIKQWLQTEALQNNP
KIEHTFDGKFIFKPVYKIKDKKSLLRLLKQHDLKGLGGIFLEDVQESLPHCDRALKSLAQ
EILYITRPSDKKKILFYNDKTATLDVDEEFVKLWRATAVDAMDDAKIEEYLEKQGIKSMQ
DHGPRKPVVPKRKKVTQKRRQFKKPRDNEHLADVLETYEDNTLTQKGVSIK