| New model in OGS2.0 | DPOGS213018 |
|---|---|
| Genomic Position | scaffold152:+ 60127-67806 |
| See gene structure | |
| CDS Length | 642 |
| Paired RNAseq reads | 5486 |
| Single RNAseq reads | 16796 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA006937 (7e-68) |
| Best Drosophila hit | troponin C at 73F, isoform A (3e-62) |
| Best Human hit | calmodulin (5e-29) |
| Best NR hit (blastp) | troponin C [Bombyx mori] (1e-80) |
| Best NR hit (blastx) | troponin C [Bombyx mori] (2e-69) |
| GeneOntology terms | GO:0005509 calcium ion binding |
| InterPro families | IPR018249 EF-HAND 2 IPR002048 Calcium-binding EF-hand IPR018248 EF-hand IPR018247 EF-Hand 1, calcium-binding site IPR011992 EF-hand-like domain |
| Orthology group | MCL13365 |
Nucleotide sequence:
ATGAAAGGCCACACTCGTAAAGCAGCAGAAATAACCCTGGTCGCTGGAATCATCAGAATC
GCGGTCAGTCGTGTTGTGCGTCTCACAGTGCTAACTAGTGACATCAAACATGGTTCTGGA
CACAGAAGACTGGGTAGACGAAAAACTACGCACAGACATTTTGTACCTGTTGCCATTGGA
GAAGAGGCTGATGAGCTCCCAGCAGAACAAATTGCCGTTCTTCGCAAAGCGTTCGATGGC
TTCGACCACAACCGCTCGGGCAGTATCCCATGTGACTTCGTCGCTGACATCCTTCGAATG
ATGGGGCAGCCCTTTAACAAGAAGATCCTTGAGGAACTCATCGAAGAAGTTGATGCTGAC
AAGTCTGGTCGTCTGGAGTTCCCTGAATTCGTAACACTGGCCGCCAAATTCATCGTAGAA
GAAGACGCTGAAGCCATGCAAAAGGAACTCAGGGAAGCATTCAGATTATACGACAAAGAA
GGCAATGGTTACATTCCCACATCGAGCCTGCGTGAGATCCTGCGAGAACTGGACGAGCAG
CTCACAGACGACGAGCTAGACGGTCTCATCCAAGAGATCGACACTGACGGCAGCGGTACC
GTGGACTTCGATGAGTTCATGGAGATGATGACTGGGGAATAA
Protein sequence:
MKGHTRKAAEITLVAGIIRIAVSRVVRLTVLTSDIKHGSGHRRLGRRKTTHRHFVPVAIG
EEADELPAEQIAVLRKAFDGFDHNRSGSIPCDFVADILRMMGQPFNKKILEELIEEVDAD
KSGRLEFPEFVTLAAKFIVEEDAEAMQKELREAFRLYDKEGNGYIPTSSLREILRELDEQ
LTDDELDGLIQEIDTDGSGTVDFDEFMEMMTGE