| New model in OGS2.0 | DPOGS211804 |
|---|---|
| Genomic Position | scaffold306:+ 103577-104999 |
| See gene structure | |
| CDS Length | 399 |
| Paired RNAseq reads | 35 |
| Single RNAseq reads | 97 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA006131 (3e-29) |
| Best Drosophila hit | Ice (5e-19) |
| Best Human hit | caspase-3 preproprotein (4e-17) |
| Best NR hit (blastp) | ICE-2 [Bombyx mori] (2e-33) |
| Best NR hit (blastx) | ICE-2 [Bombyx mori] (7e-32) |
| GeneOntology terms | GO:0004197 cysteine-type endopeptidase activity GO:0006915 apoptosis GO:0008303 caspase complex GO:0046668 regulation of retinal cell programmed cell death GO:0006508 proteolysis GO:0012501 programmed cell death GO:0048515 spermatid differentiation GO:0010165 response to X-ray GO:0046672 positive regulation of compound eye retinal cell programmed cell death GO:0035070 salivary gland histolysis GO:0010623 developmental programmed cell death GO:0035103 sterol regulatory element binding protein cleavage |
| InterPro families | IPR002138 Peptidase C14, caspase non-catalytic subunit p10 IPR001309 Peptidase C14, ICE, catalytic subunit p20 IPR016129 Peptidase C14, ICE, catalytic subunit p20, active site IPR011600 Peptidase C14, caspase catalytic IPR002398 Peptidase C14, caspase precursor p45 IPR015917 Peptidase C14, caspase precursor p45, core |
| Orthology group | MCL40035 |
Nucleotide sequence:
ATGATGATAGAGAGCGGCGACGCTGGACTCGTGGGCAAACCGAAATTGTTCTTCGTTCAG
GCATGTCGTGGTCGGTTGGTGGACGATGGTAGAAGACTTGAGATGGACGGCAGCGAGGCC
ACGTTCGTAATTCCGACACACGCGGACTTCCTCGTCTTATATTCTACTGTTGAAGATTAT
GTCTCGTTCAGAGATAGAGACGGTTCATTCATGATACAGGAGCTTTGTAACGTTATAGAA
GAGTATCAGAAATCTTGGGATCTCTTGCACATGATAACTCTGCTACACCGAAGGGTCGCG
TATAACAAAATAACGTTCGCACCATCCCACCTAGCGATCCACGACAAGAAACAAATGCCC
GAAACACGTTACTCGCTTACAAAGTTACTCAAGTTCTAG
Protein sequence:
MMIESGDAGLVGKPKLFFVQACRGRLVDDGRRLEMDGSEATFVIPTHADFLVLYSTVEDY
VSFRDRDGSFMIQELCNVIEEYQKSWDLLHMITLLHRRVAYNKITFAPSHLAIHDKKQMP
ETRYSLTKLLKF