| New model in OGS2.0 | DPOGS203747 |
|---|---|
| Genomic Position | scaffold1487:+ 25899-30485 |
| See gene structure | |
| CDS Length | 1173 |
| Paired RNAseq reads | 379 |
| Single RNAseq reads | 1607 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA011493 (5e-125) |
| Best Drosophila hit | CG2976 (2e-63) |
| Best Human hit | protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha (1e-74) |
| Best NR hit (blastp) | PREDICTED: similar to Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit (CAAX farnesyltransferase alpha subunit) (Ras proteins prenyltransferase alpha) (FTase-alpha) (Type I protein geranyl-geranyltransferase alpha subunit) (GGTase-I-... iso [Canis familiaris] (2e-82) |
| Best NR hit (blastx) | PREDICTED: similar to predicted protein [Tribolium castaneum] (6e-78) |
| GeneOntology terms | GO:0016740 transferase activity GO:0005515 protein binding GO:0030548 acetylcholine receptor regulator activity GO:0018347 protein amino acid farnesylation GO:0045213 neurotransmitter receptor metabolic process GO:0004662 CAAX-protein geranylgeranyltransferase activity GO:0008017 microtubule binding GO:0004660 protein farnesyltransferase activity GO:0043014 alpha-tubulin binding GO:0090045 positive regulation of deacetylase activity GO:0005875 microtubule associated complex GO:0090044 positive regulation of tubulin deacetylation |
| InterPro families | IPR002088 Protein prenyltransferase, alpha subunit IPR008940 Protein prenyltransferase |
| Orthology group | MCL12084 |
Nucleotide sequence:
ATGTCTGACAGTGGAGACAGTGATGTTTACTGGGTACCCTATAAGGAAAGACCGGAGTGG
AGCGATATAACTCCCGTTCCCGAAGATGATGGGATTACACCAGTAGTGGTCATTGCACAT
TCCGAAAAGTTCAAAGACGTCTATGATTACTTTAGGGCAGTACTGCAGAAGAATGAAAAA
TCAGAGCGAGCTTTACATCTCACAAAGGAGGCTGTGGAACTAAATCCAGCAAATTATACC
GTGTGGCAATATAGGAGAGATCTGCTCAAAGAATTAGCGACAGATCTGAGATCGGAGTTG
TATTATGTTGAATGTGTCATAAAACAGTCGCCAAAGAATTACCAGGTGTGGCATCACAGA
CGTGTGTTGGTCGAATGGCTTCAAGATCCGTCCCAAGAATTGGATTTGACGGGAGACACT
CTCATATCAGACCCTAAGAATTATCATGCATATAGGAGAGATCTTCTCAAAGAATTAGCG
ACAGATCTGAGATCGGAGTTGTATTATGTTGAATGTGTCATAAAACAGTCGCCAAAGAAT
TACCAGGTGTGGCATCACAGACGTGTGTTGGTCGAATGGCTTCAAGATCCGTCCCAAGAA
TTGGATTTGACGGGAGACACTCTCATATCAGACCCTAAGAATTATCATGCGTGGCAACAC
CGACAGTGGGCGATTAAAACTTTTGGACTATTTGATAAAGAGCTGGAGTTTGTGGACAAT
CTTATATCTGAAGATGTCCGCAACAACTCGGCTTGGAACCAACGCTACTTTGTTATGAAC
AATCATTTAGGCTGGTCTGATCTTAATGTGCAGAAAGAGATATGTTATACCTTGGAAAAA
ATCAGATTCATCAAAAACAATGAGAGCGCCTGGAATTATTTGAGAGGCGTCTTATTACAT
GATAAAAGAGGAGTGAGTGGTAATGCCGTGGTGCTCTCATTTTGTGAGGATTTATTTAAG
AACAGATGCCATTCACCGTATTTACTGGCATTCATTATTGATATCTGCGATGAAGTCATA
AAGAAAGGAGAGACAAGTATTACATATGGACCGGAACGGGCTCTAGAGCTTTGTAATGCA
TTGGCCGATAAATATGATAAAATCAGAACAAAGTATTGGAATTATATGGCAAATAAATTC
AAAGCACTCATAGATTTGAAAGCTACTTACTAA
Protein sequence:
MSDSGDSDVYWVPYKERPEWSDITPVPEDDGITPVVVIAHSEKFKDVYDYFRAVLQKNEK
SERALHLTKEAVELNPANYTVWQYRRDLLKELATDLRSELYYVECVIKQSPKNYQVWHHR
RVLVEWLQDPSQELDLTGDTLISDPKNYHAYRRDLLKELATDLRSELYYVECVIKQSPKN
YQVWHHRRVLVEWLQDPSQELDLTGDTLISDPKNYHAWQHRQWAIKTFGLFDKELEFVDN
LISEDVRNNSAWNQRYFVMNNHLGWSDLNVQKEICYTLEKIRFIKNNESAWNYLRGVLLH
DKRGVSGNAVVLSFCEDLFKNRCHSPYLLAFIIDICDEVIKKGETSITYGPERALELCNA
LADKYDKIRTKYWNYMANKFKALIDLKATY