| New model in OGS2.0 | DPOGS204547 |
|---|---|
| Genomic Position | scaffold424:+ 65972-80723 |
| See gene structure | |
| CDS Length | 2268 |
| Paired RNAseq reads | 222 |
| Single RNAseq reads | 639 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA005337 (0.0) |
| Best Drosophila hit | CG11206, isoform D (1e-128) |
| Best Human hit | kazrin isoform E (4e-69) |
| Best NR hit (blastp) | hypothetical protein TcasGA2_TC010503 [Tribolium castaneum] (0.0) |
| Best NR hit (blastx) | hypothetical protein TcasGA2_TC010503 [Tribolium castaneum] (1e-175) |
| GeneOntology terms | GO:0001533 cornified envelope GO:0005634 nucleus GO:0005737 cytoplasm GO:0030054 cell junction GO:0030057 desmosome GO:0031424 keratinization |
| InterPro families | IPR010993 Sterile alpha motif homology IPR001660 Sterile alpha motif domain IPR021129 Sterile alpha motif, type 1 IPR011510 Sterile alpha motif, type 2 IPR013761 Sterile alpha motif-type |
| Orthology group | MCL12137 |
Nucleotide sequence:
ATGTTTGGGATACTAACAGTGTCTTTTATTGTAGCTCTAAAAGCCGACAAGAAACGGCTC
AAAGCGGAGAAATTTGATTTGCTGAATCAAATGAAGCAACTCTACGCCACTCTTGAGGAC
AAAGAGAAGGAGCTTAGGGATTTCATCAGGAATTATGAACAGATGCGGTCTCGAAGCGGT
GCGTCCTCAGCGCTGGGTGCAGAACGAGCTGAACGCGAACGCGAGCGTGCGGCATTGTTG
CGGCATGCCCGCGACGAGGCCGAGCGCTCTTTACAACTGGCGGCCGCACTCAGCGCCCGT
GATACGCAGTTGCGGCATGCTAGGGAACAGCTTTTTGAGGCTCGAAGACAACTACAAGCA
GCAGGGTGTTTGTCCGAAGGTGAGAGTGTAGCGTCTTTGGGAATTGGTCCTCCAATGATG
CTTGGAGGTCCCACGGGTTTGATGGGTGATAGAGGTAGCTGCAGCGCAGATTCTGGAGTT
AGAGGTAGTAGCGATGGTGGCGCCACGTCGGTTTGCGGCGGAAACCTATCAGACTCCACC
GCAGAGGGCGCGCCTCCCACCCTCGACCCATACGATACAGATGCTGTATCGCTGGTGTCA
TCCGCGCACCCTATATACCAATTAAGCACGCCCCGTGACTGTAGCCCGACTCTCTCACCA
CATAACAGCGGTTCATCATTCACAAGATCTATTGATGCTGGATCACTATCTAGGTCAGTT
GAGCAGTTATCGAGTCCGGGGGAATGTGACTCTGGTATGGTTGGGATGCGGACCCGTCCT
GGGGGTTCCAAGGCCGGCCGCGGTCGGGGATCCGCTTGGGGATCCATATCTCGCGTTTTT
GCTAGAAGCAGACACCGCACCAAGTCCGGAAGCGCAGCCAGTAGTGGTCACGAGAGCGAG
CCAATATACGCTGGCACAGGCAGCACAAGTCGCGCTTGGTCTCCTTTAGGGAGTGAGGCG
GCATTACGCGAAGCTGCCTCTCTACCTCTATCAAGATGGCGGGCACCAGCCATCATCGCC
TGGCTTGAACTTGCTCTTGGCATGCCGCAATATGCAGCTGCTGTTGCTGATAATGTTAAA
AGTGGAAAGATCCGTGCTTTGAATGGGCAGGTTCTGCTCGAGTTGACGGACACGGATCTT
GAGGTCGGGTTGGGGGTGACTCAGCCAATGCACAGGAAGAAGCTGCGGCTGGCCATCGAA
GAGAGACGGCGGCCGGACCTCGTACGGAACCCTAGCATCGGACAGCTGAGTCATGCATGG
GTTGCGGCGGAGTGGTTGCCAGATCTAGGGCTATCCCAGTACGCAGAATCATTTTTAGCC
AATTTGGTGGATGCTAGAATGCTGGATACTATCAGCAAGAAGGAGCTGGAGAAATATCTT
GGTGTTACGAGAAAGTTCCATCAGGCATCCATTGTCCACGGCATTCATTTGCTACGAATC
ATGAAATATGATAGACAAGCACTGGCAGTACGGCGGCATCAGTGCGAAAATGTCGATGCG
GACCCTCTGGTTTGGACCAATCAAAGGTTTATGCGTTGGTCTCACAATATCGACTTGGGT
GAATTTGCTGAGAATCTTAAAGACAGCGGTGTCCATGGTGGTTTGGTGGTACTGGAACCA
TCATTCACTGGTGAGACCATGGCCACGGCGCTTGGTATACCACCGTCGAAGAGTATAATT
CGAAGGCATTTGGTAGCTGAATTTGATGCCCTTGTCATCCCAGCGAGGAATATGTTTGGT
CACCAAATAAGGATGTTGGGAAGACCGTTTTCAAGATCGGTTGCGACAGGCTTGCCTGGA
ATTGACTTTAGCGCTGATTCTAGACGACATAGTCTAAGGGGCTCTATAACACGAGCGTTG
GGTGTTCTCAAGCCGAAGCACGATAGACCATCACCATCTAGTTCAAGCGAGAGTTCTAGC
GTGATGAGTCTGACACAACCGTACATATCTTATTCACCTCCTATAGCAGTGCGGACGCTG
TCTCAATTGAGCATGACATACGCTCCACCACCGACACTGGCAGAGTATGAACCGATATAT
ACGCCTTTGAGTTTATATTCCCAGTCTAGCGTATCCACAAAGGATAGCCTTCAGCGCCTT
AATGATGGCAAAGATTATAATATCACCCACAGGTACGGACAAAAAGTAGATCAATCTCAT
CGAGTCAGTTCACCGTTACCTGAAACATCTGACGGAAATAAGCAAAGACGTCACAGACGA
GTGAAAAGTATAGGAGATATTAATGCTTCGAGCAAAACGACGGTTTAA
Protein sequence:
MFGILTVSFIVALKADKKRLKAEKFDLLNQMKQLYATLEDKEKELRDFIRNYEQMRSRSG
ASSALGAERAERERERAALLRHARDEAERSLQLAAALSARDTQLRHAREQLFEARRQLQA
AGCLSEGESVASLGIGPPMMLGGPTGLMGDRGSCSADSGVRGSSDGGATSVCGGNLSDST
AEGAPPTLDPYDTDAVSLVSSAHPIYQLSTPRDCSPTLSPHNSGSSFTRSIDAGSLSRSV
EQLSSPGECDSGMVGMRTRPGGSKAGRGRGSAWGSISRVFARSRHRTKSGSAASSGHESE
PIYAGTGSTSRAWSPLGSEAALREAASLPLSRWRAPAIIAWLELALGMPQYAAAVADNVK
SGKIRALNGQVLLELTDTDLEVGLGVTQPMHRKKLRLAIEERRRPDLVRNPSIGQLSHAW
VAAEWLPDLGLSQYAESFLANLVDARMLDTISKKELEKYLGVTRKFHQASIVHGIHLLRI
MKYDRQALAVRRHQCENVDADPLVWTNQRFMRWSHNIDLGEFAENLKDSGVHGGLVVLEP
SFTGETMATALGIPPSKSIIRRHLVAEFDALVIPARNMFGHQIRMLGRPFSRSVATGLPG
IDFSADSRRHSLRGSITRALGVLKPKHDRPSPSSSSESSSVMSLTQPYISYSPPIAVRTL
SQLSMTYAPPPTLAEYEPIYTPLSLYSQSSVSTKDSLQRLNDGKDYNITHRYGQKVDQSH
RVSSPLPETSDGNKQRRHRRVKSIGDINASSKTTV