| New model in OGS2.0 | DPOGS201325 |
|---|---|
| Genomic Position | scaffold1286:+ 65673-67658 |
| See gene structure | |
| CDS Length | 924 |
| Paired RNAseq reads | 881 |
| Single RNAseq reads | 2575 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA002348 (6e-72) |
| Best Drosophila hit | CG6412 (2e-71) |
| Best Human hit | elongation factor Ts, mitochondrial isoform 2 precursor (1e-48) |
| Best NR hit (blastp) | elongation factor Ts [Bombyx mori] (4e-144) |
| Best NR hit (blastx) | elongation factor Ts [Bombyx mori] (2e-143) |
| GeneOntology terms | GO:0006414 translational elongation GO:0003746 translation elongation factor activity GO:0005739 mitochondrion |
| InterPro families | IPR018101 Translation elongation factor Ts, conserved site IPR014039 Translation elongation factor EFTs/EF1B, dimerisation IPR000449 Ubiquitin-associated/translation elongation factor EF1B, N-terminal IPR001816 Translation elongation factor EFTs/EF1B IPR009060 UBA-like |
| Orthology group | MCL14979 |
Nucleotide sequence:
ATGATATTTCAGCTTGTAAGGAGTATTCATACAAGCTTCGCTTGCCGTGCTGCGGAGTCT
TCGCTTCTGGCTAAACTTAGAAAGAAGACTGGATATACCATTGCAAATTGCAAGAAAGCC
CTTGAAATGCATAACAATGATTCTGAAAAGGCTGAGACATGGTTGAATGAACAGGCGCAA
GCCATGGGTTGGGCCAAGGCTACAAAGCTTGCCGGTCGGAAGGCTTCACAGGGGCTTGTG
GCGGTGAAGTTCGATAAGCAACACGGTGCGCTGGTAGAGTTGAATTGTGAAACTGATTTC
GTAGCCAAGAATGAAAAGTTCCACAAAATGTTAGAGGATGCTGCACTCGCTTGTTACAAG
ATGGCTCACACTAATCTACAATCTAAAGGGCCCATCACTAAAATGGAGTTAGACAGTGAA
CAACTAGGGAATATATCAGTTGAGGGCAAGAAGTTGTCGGAAATTTTGGCTCTTTTCATT
GGATCAGTTGGTGAGAACGCCGTTCTTAGACGCGCTGAATGCTGGAAGGCGAATAGCAAG
GATGTCCAGATCACAGCCTACACCCACCCCGCGCCCCCCACTCCTAGTGACTACTCCTGT
GGGAAATATGGTGCTCTATTGGCCTACAAACAACCGGCTGACCTTGATGACGTAGGCAAG
CAGATCTGCCAGCACATTGTCGGCTGCGCTCCAAAGAAAATCGGCGACAAGGAAAAAGAT
AAGCCGATAGAGAATACGGATGACGAAGTCTGTCTTATATATCAGGAGTATTTGTTGGAC
CCGTCATATACGATACAAGAGGTTTTGGATAAGAACAAAGTGGAGATCGTTGATTTTGTG
AGGTTCTCGTGCGGGGAAACCGATGAAGCTAACTTACCAGGTGTTGAGAAGCAACCGCTG
GAAACTGTCCAGACCCTACAGTAG
Protein sequence:
MIFQLVRSIHTSFACRAAESSLLAKLRKKTGYTIANCKKALEMHNNDSEKAETWLNEQAQ
AMGWAKATKLAGRKASQGLVAVKFDKQHGALVELNCETDFVAKNEKFHKMLEDAALACYK
MAHTNLQSKGPITKMELDSEQLGNISVEGKKLSEILALFIGSVGENAVLRRAECWKANSK
DVQITAYTHPAPPTPSDYSCGKYGALLAYKQPADLDDVGKQICQHIVGCAPKKIGDKEKD
KPIENTDDEVCLIYQEYLLDPSYTIQEVLDKNKVEIVDFVRFSCGETDEANLPGVEKQPL
ETVQTLQ