New model in OGS2.0 | DPOGS200512  |
---|---|
Genomic Position | scaffold4447:+ 2875-10258 |
See gene structure | |
CDS Length | 1350 |
Paired RNAseq reads   | 1522 |
Single RNAseq reads   | 3629 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA009132 (0.0) |
Best Drosophila hit   | beta-Tubulin at 56D, isoform B (0.0) |
Best Human hit | tubulin beta-4 chain (0.0) |
Best NR hit (blastp)   | PREDICTED: similar to -Tubulin at 56D CG9277-PB, isoform B [Apis mellifera] (0.0) |
Best NR hit (blastx)   | beta tubulin [Notothenia coriiceps] (0.0) |
GeneOntology terms    | GO:0043234 protein complex GO:0051258 protein polymerization GO:0005198 structural molecule activity GO:0005525 GTP binding GO:0005874 microtubule GO:0007017 microtubule-based process GO:0003924 GTPase activity GO:0007018 microtubule-based movement GO:0000166 nucleotide binding |
InterPro families    | IPR002453 Beta tubulin IPR000217 Tubulin IPR003008 Tubulin/FtsZ, GTPase domain IPR018316 Tubulin/FtsZ, 2-layer sandwich domain IPR017975 Tubulin, conserved site IPR013838 Beta tubulin, autoregulation binding site IPR008280 Tubulin/FtsZ, C-terminal IPR023123 Tubulin, C-terminal |
Orthology group | MCL10040 |
Nucleotide sequence:
ATGCGTGAAATAGTTCATCTCCAGGCGGGACAGTGCGGCAATCAGATCGGCTCTAAGTTC
TGGGAGATAATATCTGACGAGCACGGCATCGACCCGACCGGCGTGTACCGCGGCAACAGC
GACTTACAGCTGGACAGAATCCAGGTGTATTACAATGAAGCAGCAGATGGTAACCGTTAC
GTGCCGCGTGCGGTGCTCGTGGACTTGGAGCCGGGCACCATGGACTCTATCAGGGGCTCG
AGCCACGGGAGACTGTTCCGACCTGATAACTACGTGTTTGGTCAGAGCGGAGCCGGAAAC
AACTGGGCGAAGGGCCACTATACGGAGGGCGCGGAATTGATTGACTCTGTCATGGACGTG
GTGAGGAAGGAGGCGGAGCCTTGCGACTGTTTACAAGGATTCCAGTTAACCCACTCGCTT
GGCGGCGGCACGGGCTCGGGGCTCGGCACGCTGCTGCTCAGCAAACTACGAGAGGAGTAC
CCGGACAGGATCGTCAACACGTTCAGTGTCACGCCTTCACCTAAGGTGTCTGACACAGTG
GTGGAGCCTTACAACGCGACGCTGTCCGTCCATCAGCTCGTGGAGAACACGGACGAGACC
TTCTGCATCGACAACGAGGCGCTCTACGACATCTGCTTCCGGACCCTGAGACTTGCAACA
CCCACGTATGGTGACCTCAACCATTTGGTGTCGTTGACTATGTCCGGAGTGACCACTTGT
CTCCGATTCCCGGGACAGTTGAACGCGGACCTCCGCAAGTTGGCCGTCAACATGGTGCCC
TTCCCACGACTGCACTTCTTTATGCCCGGGTTCGCTCCCCTCACCGCTCGCAACAGCCAG
GAGTACCGAGCGCTTACAGTTGCCGAGCTCACACAGCAGATGTTTTCTCCCGTCAACATG
ATGGCGGCGTGTGACCCTCGCCGCGGCCGTTACCTCACCGTGGCAGCCATCTTCAGAGGA
CGAGTCAGCACCAAAGAGGTGGAGGAACAAATGATCAGCGCTCAGGACAAGAACAGCAGC
TACTTCGTCGAGTGGATACCAAATAATGTGAAGGTTGCTGTGTGTGACGTCCCTCCACGC
GGCCTCAAAATGGCTGCCACCTTCGTTGGGAACACGACCGCTATACAGGAAATATTCAAA
AGAATCTCTGAACAGTTCACGTTAATGTTTAGGAGGAAGGCCTTCCTTCATTGGTACACG
GGCGAGGGGATGGACGAGATGGAGTTCACCGAGGCGGAAAGCAACATGAACGATCTGGTC
TCCGAGTACCAACAGTATGAGGAAGTTGGAGTTGAAGACGAGTTTGATGAACAAGAAGAA
ACACAGGAAGAGGAATATCCTGACGAATAA
Protein sequence:
MREIVHLQAGQCGNQIGSKFWEIISDEHGIDPTGVYRGNSDLQLDRIQVYYNEAADGNRY
VPRAVLVDLEPGTMDSIRGSSHGRLFRPDNYVFGQSGAGNNWAKGHYTEGAELIDSVMDV
VRKEAEPCDCLQGFQLTHSLGGGTGSGLGTLLLSKLREEYPDRIVNTFSVTPSPKVSDTV
VEPYNATLSVHQLVENTDETFCIDNEALYDICFRTLRLATPTYGDLNHLVSLTMSGVTTC
LRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTARNSQEYRALTVAELTQQMFSPVNM
MAACDPRRGRYLTVAAIFRGRVSTKEVEEQMISAQDKNSSYFVEWIPNNVKVAVCDVPPR
GLKMAATFVGNTTAIQEIFKRISEQFTLMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV
SEYQQYEEVGVEDEFDEQEETQEEEYPDE