DPGLEAN12277 in OGS1.0

New model in OGS2.0DPOGS200512 
Genomic Positionscaffold4447:+ 2875-10258
See gene structure
CDS Length1350
Paired RNAseq reads  1522
Single RNAseq reads  3629
Migratory profilesQuery via corresponding ESTs
Best Bmobyx hitBGIBMGA009132 (0.0)
Best Drosophila hit  beta-Tubulin at 56D, isoform B (0.0)
Best Human hittubulin beta-4 chain (0.0)
Best NR hit (blastp)  PREDICTED: similar to -Tubulin at 56D CG9277-PB, isoform B [Apis mellifera] (0.0)
Best NR hit (blastx)  beta tubulin [Notothenia coriiceps] (0.0)
GeneOntology terms







  
GO:0043234 protein complex
GO:0051258 protein polymerization
GO:0005198 structural molecule activity
GO:0005525 GTP binding
GO:0005874 microtubule
GO:0007017 microtubule-based process
GO:0003924 GTPase activity
GO:0007018 microtubule-based movement
GO:0000166 nucleotide binding
InterPro families






  
IPR002453 Beta tubulin
IPR000217 Tubulin
IPR003008 Tubulin/FtsZ, GTPase domain
IPR018316 Tubulin/FtsZ, 2-layer sandwich domain
IPR017975 Tubulin, conserved site
IPR013838 Beta tubulin, autoregulation binding site
IPR008280 Tubulin/FtsZ, C-terminal
IPR023123 Tubulin, C-terminal
Orthology groupMCL10040

Nucleotide sequence:

ATGCGTGAAATAGTTCATCTCCAGGCGGGACAGTGCGGCAATCAGATCGGCTCTAAGTTC
TGGGAGATAATATCTGACGAGCACGGCATCGACCCGACCGGCGTGTACCGCGGCAACAGC
GACTTACAGCTGGACAGAATCCAGGTGTATTACAATGAAGCAGCAGATGGTAACCGTTAC
GTGCCGCGTGCGGTGCTCGTGGACTTGGAGCCGGGCACCATGGACTCTATCAGGGGCTCG
AGCCACGGGAGACTGTTCCGACCTGATAACTACGTGTTTGGTCAGAGCGGAGCCGGAAAC
AACTGGGCGAAGGGCCACTATACGGAGGGCGCGGAATTGATTGACTCTGTCATGGACGTG
GTGAGGAAGGAGGCGGAGCCTTGCGACTGTTTACAAGGATTCCAGTTAACCCACTCGCTT
GGCGGCGGCACGGGCTCGGGGCTCGGCACGCTGCTGCTCAGCAAACTACGAGAGGAGTAC
CCGGACAGGATCGTCAACACGTTCAGTGTCACGCCTTCACCTAAGGTGTCTGACACAGTG
GTGGAGCCTTACAACGCGACGCTGTCCGTCCATCAGCTCGTGGAGAACACGGACGAGACC
TTCTGCATCGACAACGAGGCGCTCTACGACATCTGCTTCCGGACCCTGAGACTTGCAACA
CCCACGTATGGTGACCTCAACCATTTGGTGTCGTTGACTATGTCCGGAGTGACCACTTGT
CTCCGATTCCCGGGACAGTTGAACGCGGACCTCCGCAAGTTGGCCGTCAACATGGTGCCC
TTCCCACGACTGCACTTCTTTATGCCCGGGTTCGCTCCCCTCACCGCTCGCAACAGCCAG
GAGTACCGAGCGCTTACAGTTGCCGAGCTCACACAGCAGATGTTTTCTCCCGTCAACATG
ATGGCGGCGTGTGACCCTCGCCGCGGCCGTTACCTCACCGTGGCAGCCATCTTCAGAGGA
CGAGTCAGCACCAAAGAGGTGGAGGAACAAATGATCAGCGCTCAGGACAAGAACAGCAGC
TACTTCGTCGAGTGGATACCAAATAATGTGAAGGTTGCTGTGTGTGACGTCCCTCCACGC
GGCCTCAAAATGGCTGCCACCTTCGTTGGGAACACGACCGCTATACAGGAAATATTCAAA
AGAATCTCTGAACAGTTCACGTTAATGTTTAGGAGGAAGGCCTTCCTTCATTGGTACACG
GGCGAGGGGATGGACGAGATGGAGTTCACCGAGGCGGAAAGCAACATGAACGATCTGGTC
TCCGAGTACCAACAGTATGAGGAAGTTGGAGTTGAAGACGAGTTTGATGAACAAGAAGAA
ACACAGGAAGAGGAATATCCTGACGAATAA

Protein sequence:

MREIVHLQAGQCGNQIGSKFWEIISDEHGIDPTGVYRGNSDLQLDRIQVYYNEAADGNRY
VPRAVLVDLEPGTMDSIRGSSHGRLFRPDNYVFGQSGAGNNWAKGHYTEGAELIDSVMDV
VRKEAEPCDCLQGFQLTHSLGGGTGSGLGTLLLSKLREEYPDRIVNTFSVTPSPKVSDTV
VEPYNATLSVHQLVENTDETFCIDNEALYDICFRTLRLATPTYGDLNHLVSLTMSGVTTC
LRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTARNSQEYRALTVAELTQQMFSPVNM
MAACDPRRGRYLTVAAIFRGRVSTKEVEEQMISAQDKNSSYFVEWIPNNVKVAVCDVPPR
GLKMAATFVGNTTAIQEIFKRISEQFTLMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV
SEYQQYEEVGVEDEFDEQEETQEEEYPDE