| New model in OGS2.0 | DPOGS203884 |
|---|---|
| Genomic Position | scaffold697:+ 24241-25202 |
| See gene structure | |
| CDS Length | 453 |
| Paired RNAseq reads | 133 |
| Single RNAseq reads | 859 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA003820 (3e-76) |
| Best Drosophila hit | Rpb8 (1e-68) |
| Best Human hit | DNA-directed RNA polymerases I, II, and III subunit RPABC3 (2e-59) |
| Best NR hit (blastp) | PREDICTED: similar to Rpb8 CG11246-PA [Tribolium castaneum] (2e-71) |
| Best NR hit (blastx) | PREDICTED: similar to Rpb8 CG11246-PA [Tribolium castaneum] (6e-71) |
| GeneOntology terms | GO:0005665 DNA-directed RNA polymerase II, core complex GO:0003899 DNA-directed RNA polymerase activity GO:0006366 transcription from RNA polymerase II promoter |
| InterPro families | IPR005570 RNA polymerase, Rpb8 IPR016027 Nucleic acid-binding, OB-fold-like IPR012340 Nucleic acid-binding, OB-fold |
| Orthology group | MCL13375 |
Nucleotide sequence:
ATGGCGGGAGTGTTGTTCGAAGATATATTCAACGTCAAAGACATGGACCAGGGCGGTAAG
AAATTCGATCGTGTGAGCAGATTGCATTGTGAATCAGAATCGTTTAAAATGGATCTCATT
TTGGATATAAATTCTTGGATATATCCTATGGAGCTGGGAGATAAGTTCAGATTGGTTTTG
GCCACAACATTACGAGAAAACGGATATCCGGATGGCGGTGAATGGAATCCTCTCGAAACA
GAGGGAAATAGAGCTGATAGCTTTGAATATGTTATGTACGGAAAAGTTTATAGACTAGAT
GGTGATGAATTGGCCATGGAACCGACATCCCGACTGTCAGCTTTTGTTTCATTCGGTGGA
CTCCTCATGCGGTTGCAGGGTGACGCCAACAACCTGCACGGCTTCGAAGTCGACCAGCAC
ATGTACTTGTTAATGAAGAAACTAGCTTTTTAA
Protein sequence:
MAGVLFEDIFNVKDMDQGGKKFDRVSRLHCESESFKMDLILDINSWIYPMELGDKFRLVL
ATTLRENGYPDGGEWNPLETEGNRADSFEYVMYGKVYRLDGDELAMEPTSRLSAFVSFGG
LLMRLQGDANNLHGFEVDQHMYLLMKKLAF