| New model in OGS2.0 | DPOGS209862 |
|---|---|
| Genomic Position | scaffold5089:+ 747-3170 |
| See gene structure | |
| CDS Length | 681 |
| Paired RNAseq reads | 173 |
| Single RNAseq reads | 1004 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA001683 (1e-106) |
| Best Drosophila hit | beta-Tubulin at 56D, isoform B (2e-95) |
| Best Human hit | tubulin beta-3 chain isoform 1 (4e-95) |
| Best NR hit (blastp) | putative tubulin beta-1 chain [Diaphorina citri] (3e-103) |
| Best NR hit (blastx) | beta tubulin [Ixodes scapularis] (2e-96) |
| GeneOntology terms | GO:0005200 structural constituent of cytoskeleton GO:0007017 microtubule-based process GO:0045298 tubulin complex GO:0005525 GTP binding GO:0016203 muscle attachment GO:0005874 microtubule GO:0051258 protein polymerization GO:0005198 structural molecule activity GO:0007018 microtubule-based movement GO:0003924 GTPase activity |
| InterPro families | IPR008280 Tubulin/FtsZ, C-terminal IPR018316 Tubulin/FtsZ, 2-layer sandwich domain IPR002453 Beta tubulin IPR003008 Tubulin/FtsZ, GTPase domain IPR023123 Tubulin, C-terminal IPR000217 Tubulin |
| Orthology group | ND |
Nucleotide sequence:
ATGTCCGGTGTCACGACTTGCCTCCGTTTCCCTGGACAATTGAATGCTGATCTCAGGAAG
CTGGCCGTCAACATGGTGCCCTTCCCGAGACTGCACTTTTTTATGCCCGGCTTCGCTCCT
CTGACAGCAAGAAACTCGTTCAACTACCGCCCTCAGACCGTTCCGGAGCTTATGAGCCAA
ATGTTCAACCCTGGGAACATGATGACGGCTTGCGACCCCCGTCACGGCCGCTACCTCACA
GTGGCCACCGTGTTCAGAGGTCACATGTCCATGAGAGAGGTCGACGACCAAGTGTTGGCG
GTCCAGAACAAGAACTCGAGCTACTTCGTGGAATGGATCCCCAACAACCTGAAGGTGGCC
GTCTGCGACGTCCCGCCGCGCGGCCTCAAGATGTCCGCCACGTTCATCGGCAACTCCACC
GCCATCCAGGAGATATTCAAACGCATTTCAGAACAGTTCACCGCCATGTTCAGGAGAAGA
GCGTTCCTCCACTGGTACACGGGCGAGGGTATGGACGAGATGGAGTTCACGGAGGCGGCC
AGCAACATGGCCGACCTCATATCAGAGTACCAACAGTACCAGGAGGCTAACGTGGATGAT
GAAGAGGTAGGCTTCGACGAGGAAGAGGAAGAAGACGATCAAAATTACGACCACAAGGAG
TCGGTGCACGTCCCGCTATAG
Protein sequence:
MSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTARNSFNYRPQTVPELMSQ
MFNPGNMMTACDPRHGRYLTVATVFRGHMSMREVDDQVLAVQNKNSSYFVEWIPNNLKVA
VCDVPPRGLKMSATFIGNSTAIQEIFKRISEQFTAMFRRRAFLHWYTGEGMDEMEFTEAA
SNMADLISEYQQYQEANVDDEEVGFDEEEEEDDQNYDHKESVHVPL