| New model in OGS2.0 | DPOGS216119 |
|---|---|
| Genomic Position | scaffold281:+ 14798-17323 |
| See gene structure | |
| CDS Length | 666 |
| Paired RNAseq reads | 95 |
| Single RNAseq reads | 277 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA014560 (2e-96) |
| Best Drosophila hit | RabX4 (1e-32) |
| Best Human hit | ras-related protein Rab-33B (9e-59) |
| Best NR hit (blastp) | hypothetical protein BRAFLDRAFT_95080 [Branchiostoma floridae] (5e-63) |
| Best NR hit (blastx) | RAB-33, putative [Ixodes scapularis] (2e-60) |
| GeneOntology terms | GO:0005794 Golgi apparatus GO:0015031 protein transport GO:0007264 small GTPase mediated signal transduction GO:0005525 GTP binding GO:0000166 nucleotide binding |
| InterPro families | IPR005225 Small GTP-binding protein IPR001806 Ras GTPase IPR013753 Ras IPR020851 Small GTPase IPR006688 ADP-ribosylation factor IPR003577 Ras small GTPase, Ras type IPR003579 Ras small GTPase, Rab type IPR003578 Small GTPase, Rho type IPR002041 Ran GTPase |
| Orthology group | MCL20498 |
Nucleotide sequence:
ATGTCAGATTCAACAAACGAAATTGTTCCTGGGTTAGGACAGAAGAAAGTTTTTAAAATA
ATTGTGCTGGGTGATTCTGGGGTAGGAAAAACATGTCTCACGTACCGTTTTTGTGAAGGA
CAGTTTTTAGATAAATCAGAGGCTACAATAGGGGTGGACTTCCGAGAAAGAACAATACGC
ATTCGTAACGAAGATATTAAGTTACAGCTATGGGACACAGCTGGTCAAGAGAGGTTCCGT
AAATCCATGGTGCAGCATTACTACCGTAATGTACATGCGGTGGTGATAGTTTATGATGTC
ACCAAACCGGAAACATTCCATTCCATTACAAGCTGGATGTCGGAAGTGGAGTCCCACGGT
TTGACAAAAGCTCCTCGTGTGCTGGTCGGTAACAAATGTGACTGTGGATCACCTTCTGAT
AGACTGGCCACAGTGTATGCACAACGTCTAGCTGATAGATATGGGATGCCGCTCTTCGAA
ACCTCAGCCTTACTGGACTCGGAGTGTGACAATGTCGAGTCCATCTTCATAACCCTGGCA
CACAAGCTATACTCTCATCAGCCTTTCAGGGTTGTGAGTGTTGAGGGAGAACTAGGTCCA
AGACTGGTAACACTTAATCGACACAAGAGGAATACAACAAGTAATGATAATTGCCTCTGC
AGTTAG
Protein sequence:
MSDSTNEIVPGLGQKKVFKIIVLGDSGVGKTCLTYRFCEGQFLDKSEATIGVDFRERTIR
IRNEDIKLQLWDTAGQERFRKSMVQHYYRNVHAVVIVYDVTKPETFHSITSWMSEVESHG
LTKAPRVLVGNKCDCGSPSDRLATVYAQRLADRYGMPLFETSALLDSECDNVESIFITLA
HKLYSHQPFRVVSVEGELGPRLVTLNRHKRNTTSNDNCLCS