| New model in OGS2.0 | DPOGS204643 |
|---|---|
| Genomic Position | scaffold1750:+ 32923-37132 |
| See gene structure | |
| CDS Length | 1905 |
| Paired RNAseq reads | 1640 |
| Single RNAseq reads | 3798 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA009473 (6e-28) |
| Best Drosophila hit | apoptosis inducing factor, isoform B (8e-101) |
| Best Human hit | apoptosis-inducing factor 1, mitochondrial isoform 1 precursor (8e-95) |
| Best NR hit (blastp) | PREDICTED: similar to Programmed cell death protein 8, mitochondrial precursor (Apoptosis-inducing factor) isoform 1 [Apis mellifera] (5e-129) |
| Best NR hit (blastx) | PREDICTED: similar to Programmed cell death protein 8, mitochondrial precursor (Apoptosis-inducing factor) isoform 1 [Apis mellifera] (3e-119) |
| GeneOntology terms | GO:0006917 induction of apoptosis GO:0006309 DNA fragmentation involved in apoptotic nuclear change GO:0005758 mitochondrial intermembrane space GO:0005634 nucleus GO:0016491 oxidoreductase activity GO:0050660 FAD binding GO:0045454 cell redox homeostasis GO:0055114 oxidation reduction GO:0043067 regulation of programmed cell death GO:0007005 mitochondrion organization GO:0005739 mitochondrion |
| InterPro families | IPR016156 FAD/NAD-linked reductase, dimerisation IPR013027 FAD-dependent pyridine nucleotide-disulphide oxidoreductase IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation IPR001327 Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region |
| Orthology group | MCL11963 |
Nucleotide sequence:
ATGTTAAGAGCAGTTGCAAGCATTTATGTCGAGGGTCAGACTCTTGTCCGGAGAGATGTA
TTTAAATTATTTCGAGCCTGTGCGTACTCAAGTTCGTCACCAGCTGAGCAGATAGTGTTG
AGCAGTGATGCTATTAGGCATAGTCCCTCAGCCCGTACCAGATGTTCCTCGAGAGCTGAC
TTTGGAGGCACCGGGAGTGCAGGGGGCTCGGAGAAAAAAGGGAATACAGAATCCAGTTCT
CCACCTCCACAACCATCTCCGAATCCTGGATCTCAGCGAGTCTGGTCGGCTTTAGCTGCT
TTCGCCATCACTGTGTCACTAGGCGGAGCCTACCTTTATAAGAAACGTAATGATAATGAA
CTGGGTGAAGCACAGATTATCAATGACGGTCCAATAGAGAAGAAAAAGGAGAGAAAGAAC
ATTGCTATTCCCCCAACCGCTGCGAGTCTTCCCACTCATGTGCAGTACTTGCTAGTGGGT
GCCGGTACCGCCTCGTTCGCTGCCATGAGAGCCATCAGGAGCGCGCGGCCCGAAGCTCAG
GTGCTTATGGTCGGAGAGGAGGCAGCCCTGCCATATATGCGACCGCCTCTCAGTAAGGAA
CTGTGGCGAGAGAAAGATCTACCCGCCCGCTTTGATCATCCCGACGATATATCCTTCCGT
CAGTGGAACGGTCGGCGCCGAAGCCTGCTCTACGAGCCGAATGCATTTTACACGGCTGCC
GACAAACTGAGCGAGGGCGAAGCGGGGGCGGGAGTCGCTCGCGGATGGAGAGTCATGAGC
ATCGACCCTTCAGCTCACAGCGCTGTGCTATCCAACCTCGACACTGATGAGAGCCACGTG
TTGACGTACGACAAGTGTCTCATAGCTACAGGTGTTAGAGCAAGGCGGATTCCCGCCCTG
CGAACAGCTGCAGCAGCTGGGAGGTCGTTGCAGCTGAGATCTGTTCACGATACAGCCCGC
CTCGCTGCCGCAGTGGATGATCCGGGTGTCAAGGATGTAGCGGTCGTGGGCGGTGGATTC
CTAGCTTCAGAGCTCAGCGCCGCCCTCGCTGATAGACTTCGTCCCGAAGGTAAGCGTGTT
ATGCAAGTGTTCCGGGAGAGCGCTCCGCTAGAGGGCGTGTTGCCGCACTACCTGGCTGCT
GAGGCGGCGCGCAGACTGGAAGAGGCGGGCGTCACACTGGTGCCTAGTGAGGAAGTGGTG
GACAGTGCTGTGGACGAGTCGGGTCGTGTGTCATTGCGGTTGTCGTCCGGCGCTACACTG
GGAGCGAACGTCGTAGCAGAATGCGCGGGCAGCGAGCCCGCTACGGAGCTAGCCGTAGCA
TCGGGCCTGGAGCTGCACCCTGAGTTGGGCGGTGTCCTCGTAGACGCCGAGCTACGAGCT
CGATCGGACTTGTTCGCGGCCGGCGACGTAGCCTGCTTCTACGATGTAGCTCTCGGACGT
AGGCGCGTAGAGCATCACGATCACGCGGTGGTGTCGGGTCGCCTGGCCGGGGAGAACATG
GCCGGCGTGAAGCCTCCACAACACTACAAGCACCAGAGCATGTTCTGGAGCGACCTCGGA
CCACAGCTGGGATATGAGGCGATAGGTATAATAGATTCCGAGCTGCGCACGGTGGGCGTG
TTCTCGGCAGACGCGGTCAAGGAACAGTCGTCCGAGTCGAGATCCTTAGGGGCGGCGGAC
GCGGCCGACGACAAGGTGGAGAGTGGGGAGGGGGCGAAGCCCGAGTCGGCGCCGAAGAGA
TACGACCGCGGCGTCGTGTTCTATCTGAGAGAGAAGCGTGTAGTCGGTGTACTCCTGTGG
AACCTATTCAACCGCTTGCATGTCGCTAGACAGGTCCTGGCGCAGGGCGAGTTCGATGAC
CTCTTCGAAGTGGCGAAGCTCTTCACTCTTAACGACGAGGAGTAG
Protein sequence:
MLRAVASIYVEGQTLVRRDVFKLFRACAYSSSSPAEQIVLSSDAIRHSPSARTRCSSRAD
FGGTGSAGGSEKKGNTESSSPPPQPSPNPGSQRVWSALAAFAITVSLGGAYLYKKRNDNE
LGEAQIINDGPIEKKKERKNIAIPPTAASLPTHVQYLLVGAGTASFAAMRAIRSARPEAQ
VLMVGEEAALPYMRPPLSKELWREKDLPARFDHPDDISFRQWNGRRRSLLYEPNAFYTAA
DKLSEGEAGAGVARGWRVMSIDPSAHSAVLSNLDTDESHVLTYDKCLIATGVRARRIPAL
RTAAAAGRSLQLRSVHDTARLAAAVDDPGVKDVAVVGGGFLASELSAALADRLRPEGKRV
MQVFRESAPLEGVLPHYLAAEAARRLEEAGVTLVPSEEVVDSAVDESGRVSLRLSSGATL
GANVVAECAGSEPATELAVASGLELHPELGGVLVDAELRARSDLFAAGDVACFYDVALGR
RRVEHHDHAVVSGRLAGENMAGVKPPQHYKHQSMFWSDLGPQLGYEAIGIIDSELRTVGV
FSADAVKEQSSESRSLGAADAADDKVESGEGAKPESAPKRYDRGVVFYLREKRVVGVLLW
NLFNRLHVARQVLAQGEFDDLFEVAKLFTLNDEE