| New model in OGS2.0 | DPOGS200325 |
|---|---|
| Genomic Position | scaffold629:+ 123513-131018 |
| See gene structure | |
| CDS Length | 2049 |
| Paired RNAseq reads | 696 |
| Single RNAseq reads | 1757 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA005621 (4e-30) |
| Best Drosophila hit | krimper (6e-10) |
| Best Human hit | tudor domain-containing protein 1 (3e-07) |
| Best NR hit (blastp) | hypothetical protein AaeL_AAEL009987 [Aedes aegypti] (3e-23) |
| Best NR hit (blastx) | hypothetical protein AaeL_AAEL009987 [Aedes aegypti] (8e-24) |
| GeneOntology terms | GO:0008270 zinc ion binding GO:0003676 nucleic acid binding GO:0030717 karyosome formation GO:0007319 negative regulation of oskar mRNA translation GO:0007310 oocyte dorsal/ventral axis specification GO:0043186 P granule GO:0048471 perinuclear region of cytoplasm |
| InterPro families | IPR008191 Maternal tudor protein IPR000571 Zinc finger, CCCH-type IPR018351 Tudor subgroup IPR002999 Tudor domain |
| Orthology group | MCL18104 |
Nucleotide sequence:
ATGCACCGCCGGCAGGAATTGGATGAAAGAATAAAAGTTTTTCTAGATAAATGCGATCTC
GCCATCGATGGAATAGAAAATCTTAAAACACAGGCCAAAAGCTTCGTCGATCACTTAAAT
TGTGAACCGTCAGAACTGAAAGACCGATTTCTCAATTGTATGAAGAAATTAGATGAATAT
AATTATCTCATAACAGATTTTAATTTAGCTGTGAGTAAAATTGATTCAAACAGCACTCCA
AGCAGCACTCCCGTTCAAGACATCTCAACTAGTTTAATGGTACCAGAATCTGTTAGTTAT
AACCTCCTTGATGCAATCAGTGAACCGAAACCCTCAACCTCGAAAGCTCCACAGAAACAT
AAAAAGAAGAGAGTGCCAAGGGAGGATCAACTTCTCATAACATTTTCAAGCAATTCCTGT
TCATCGGAGAGTGTTCCAATAACAAAATCTGAAAAGAATATCGAATCTGATATTGAAGAA
AATCTTAAAAAGATCTCCTTAGATGATTCTTGCAGTGAATGCAACCTGCCAGCCCAGAGC
ATCTTGCAGGTGGACAACATTTACCCAGCTGTTATAGTCCATGTAGACGGCATATCATTC
TGGGTTATAACAGACAACCTGACGGAGGTCTGTGATTTGATGACAGAAATGACAAGTTAC
TATAAAGAGAATCCGGTGCAGCTAAATCTCGACCAAGTAAGGGAGTTAACCTACTGCGCA
TATTATGACAACGAAGACAATGAGTGCTTCTATAGAGGACTGTTCATTAGACTGAGTGAG
GACGACATGAGTATGGCGGAGGTGTTCCTGGTGGACACAGGTGAGACTCGCCGGGTTCAG
TCTTCATCGCTTCAGCCTCTGCTGCCGCAGTTTGCTAGCACACCACCACATGCACGGTGC
TGCCATCTAGCGGGGCCAGTTTCAGATGCACTCGATAGCTATGAAGATCTGATAGAGGGA
AATCTGAAGAAGTACATCGGGAAGACATGCAAGATTAAGGTTGATGATAACACATCGGAA
TCACTGGGGGTGTATGTGATCGTTAAGTCCGATACATCACCAGTCCATGAGATTCTCAAC
GACATGATCCTCAAGGAGAGCTTGGCTTTAACAGATGATAAAACCTCTCGAGGATGTGGG
TCGGAGGTCGATGGGTTTGATGAGTCTGACTTCGATATAGCAAACTGTCCCGAATACGAG
GACCCTCTCGAAGCTGTTACGGGTTATCGCAACCGTGATGAAATAGACATCTGCAAGCAC
TACAAGGGAGGAGCGGACAGGACCTGCTTTAAGGGTTCCAGGTGTACGAAGAAACATGTA
GTCAAACATCCAGATGGCTGGACGCTAGATCAGGTGCCAGTGGTGGCCAAGTACCGGCCG
CTGCCGCTCCCCGCCCCTGACGCGTGGCTGAAGGTCAAGGTCACGCACGTCGCGCACTTT
GACCGCTTCTACGTACACATTGTGGACGAGAAACAGGTCAAGTGTCCAGGTCCTCCCAGT
TTCGGCGTTGTGCTGCCTCCGAGGAGCCTGGAGGAGCTGGTCACTGACATGAACAGTAAC
GCCGCCCGCATGTCCTACAAACAACTCAAGATAGTGCCAGCGCCTGGCGAGCTGGTGGCG
GCGTTGTACCTGGACGGTATGTGGTACCGAGCGAGAGTGGTGTCTTCCACACGAGCTGAC
CAAAATGTAGAGGTGATGTACATAGACTACGGTAACGTAGTGTGGGTGAAGGAGGACGCG
ATCCGTGTGCTGGAGCCTCGTTACTGGGCGCTAGAGGCGCAGGCCTGTCGCTGCGCCCTG
GCCGGGGTGCTGTCCACCACCAGCGACTCCCGACACTGGGCGGCCGCTAGGAATCAGCTC
ACCACACTCATCAACGACAGGACCCTACGGGCTCATGTCATAGCTCGGGATTACGACGAA
ATAACAGTGGAACTGTTTGATGATAAGGATCAGAGCATCGGCGAGCTCATGGCGGCCGGA
GGTTACGTGAAGCTCGAACACTATGACGTCATATCCGACACCGGCCGCACGCAGATCGTT
GTACCTTAA
Protein sequence:
MHRRQELDERIKVFLDKCDLAIDGIENLKTQAKSFVDHLNCEPSELKDRFLNCMKKLDEY
NYLITDFNLAVSKIDSNSTPSSTPVQDISTSLMVPESVSYNLLDAISEPKPSTSKAPQKH
KKKRVPREDQLLITFSSNSCSSESVPITKSEKNIESDIEENLKKISLDDSCSECNLPAQS
ILQVDNIYPAVIVHVDGISFWVITDNLTEVCDLMTEMTSYYKENPVQLNLDQVRELTYCA
YYDNEDNECFYRGLFIRLSEDDMSMAEVFLVDTGETRRVQSSSLQPLLPQFASTPPHARC
CHLAGPVSDALDSYEDLIEGNLKKYIGKTCKIKVDDNTSESLGVYVIVKSDTSPVHEILN
DMILKESLALTDDKTSRGCGSEVDGFDESDFDIANCPEYEDPLEAVTGYRNRDEIDICKH
YKGGADRTCFKGSRCTKKHVVKHPDGWTLDQVPVVAKYRPLPLPAPDAWLKVKVTHVAHF
DRFYVHIVDEKQVKCPGPPSFGVVLPPRSLEELVTDMNSNAARMSYKQLKIVPAPGELVA
ALYLDGMWYRARVVSSTRADQNVEVMYIDYGNVVWVKEDAIRVLEPRYWALEAQACRCAL
AGVLSTTSDSRHWAAARNQLTTLINDRTLRAHVIARDYDEITVELFDDKDQSIGELMAAG
GYVKLEHYDVISDTGRTQIVVP