| New model in OGS2.0 | DPOGS204771 |
|---|---|
| Genomic Position | scaffold8693:+ 1-4130 |
| See gene structure | |
| CDS Length | 2445 |
| Paired RNAseq reads | 5157 |
| Single RNAseq reads | 12246 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA010194 (5e-45) |
| Best Drosophila hit | domino, isoform A (2e-90) |
| Best Human hit | helicase SRCAP (4e-76) |
| Best NR hit (blastp) | Helicase, putative [Pediculus humanus corporis] (9e-145) |
| Best NR hit (blastx) | PREDICTED: similar to domino CG9696-PD, isoform D [Apis mellifera] (5e-94) |
| GeneOntology terms | GO:0016585 chromatin remodeling complex GO:0016251 general RNA polymerase II transcription factor activity GO:0008283 cell proliferation GO:0004386 helicase activity GO:0048477 oogenesis GO:0008094 DNA-dependent ATPase activity GO:0006325 chromatin organization GO:0016458 gene silencing GO:0002165 instar larval or pupal development GO:0005634 nucleus GO:0035207 negative regulation of hemocyte proliferation GO:0030097 hemopoiesis GO:0003677 DNA binding GO:0005524 ATP binding GO:0000381 regulation of alternative nuclear mRNA splicing, via spliceosome GO:0045747 positive regulation of Notch signaling pathway GO:0035222 wing disc pattern formation GO:0005515 protein binding GO:0010629 negative regulation of gene expression |
| InterPro families | IPR001650 Helicase, C-terminal |
| Orthology group | ND |
Nucleotide sequence:
GTCCGCTCACCGCCGCGCCAGCCTGCGGCGCATGGCCGCGGTCAACGAGCGCCGCTGCTG
GCGCCTGCCCCTGTTCGGCGCGGACTTGCGCGCGGCGGTGGACGTGGGTCCGCCTCCCTT
GCCGCCGCGGGATATCTCGGACGTGCTCCGCGACCTGCACGACGTCATCGACAGGTTCAT
GATCTGCTGGTCGTCGTGCCGGGCGCGCGGGCTCCAGATGTGGGCGGGCGCGGGGGAGGG
GGCGCGGGCCTGGCGGCGGGCGGCGCGCCCCCCCCGAGGGCGGGGCTGCGAGCCGCGCGC
GCCGCCCTCACCTTGCTTCACGTTCCGGCCGCGCGCGCAGCCGTCGCCTTCCCGCACCCG
AGACTGCTGCAATACGACTGCGGTAAGCTGCAGACGCTGGACGGTCTGCTCCGGCGGCTG
AAGGCGGGCGGCCACCGCGTGCTGATCTTCACTCAGATGACGAGGGTGCTGGACGTGCTG
GAGGCGTTTCTCTGTATGCACGGCCACGCCTACCTCCGCCTGGACGGCGCCACCCGTGTG
GATCAGCGCCAGCCGCTCGTGGACCGATTCAACGCGGATCCTCGAATTTTCGCTTTCATC
CTGTCCACGCGCAGCGGCGGCGTCGGCCTCAACCTCACCGGAGCGGACTCCGTGGTGTTC
TACGACTCGGACTGGAACCCCACCATGGACGCGCAGGCTCAGGACCGCTGCCACCGGATC
GGTCAGACGCGCGACGTGCACGTGTTCCGCCTCGTCACCACGGCCACCGTCGAAGAGAAC
ATTCTGCGCAAGGCCGAACAGAAACGGACCCTCGGCCACCTCGCCATCGAAGACGGACAC
TTCACCACGTCCTATCTGAGAGCGGCCAACATCAAGGAGTTGTTCGGAGCGGAGACGGAG
CCGACGGCCGGCCAGAGAGACTGCGAATCGGCAGAGGGTGGGGAGTTGGAGTCCGCCCTC
GCGGCCGCGGAGGACGAGGCGGACGCCGCCGCCGCCCAGGCGGCCAGGGCGGAGGCTCAG
GGTGACCTCGCCGAGTTCGACGAGACCGTACCGCTAGATGAAGACACGCGCGCAGCTTCC
CCCGGACATGCGGGAGACGAAGACCGGGGAGAGTTCGCCGCCCTCATGAAACAGTTAACG
CCGGTGGAGAAATACGCAATGAGACTGGTGGAGAGCAGCGAGGCGGCCACTGAGGCGGAG
CGGGCGGCGCTCGGGGAGATGAGGAGGCAGCTGAGGGAGTGGGAACAGGCGAGGCGCGCG
CTCCGGGACGAGGCTAGCGACCAGCACGAGCAAGAGACGGAACCGGAGCACGACCAGGAC
CTGGAGCTCACTTACTGTCGGGAGGACGCCCGCACGGAGATATGGATCGACGGCAACGGA
GCGGCGGAGCGCATGCCGATGTGGTGTCCGCCCACCCCGCCCTCCAGCGACGGAGACGTG
TACTGCGACAGCTGGGCGCGAGCCCTGTACCGGCGTGGGGCGGCCGCCGACGCTCTCCTA
CCGCCCGTCCGCTGGAGAGACTCTCGTGCTCCGCGGTCACCGCGCCGCACTAGGCCGGCT
CCCCGCTCCGCCCACGCTCCTCCTTCGCTGTTCGACCGCGGCGGCCCGCGTCCACGGCCC
CGCGTCCGCGCGCCCCCCGCCCCGCCCAGGGACCACGTCACTCCTCCGCCCGACTGGGCT
CCTTGCGAGGACGCCGCTCTACGGCGAGCGCTCCGTCTGCAGCGTTTACCGCCGGAACCT
CCGGCCGCTCACGCTCCCAACTGGGATTGGCTCGCCGACCTGGTCGGGGAGGTCGCCCGC
GCCTATCGCTCTCCCCGCTCCTGTCGCGATCGTCACGACGCGCTCGCCGACCCGGAGCGC
GCCCGCCGCAAACATCGGAAGCCTCCGCCGGCCCGACGTCGGCCGGACGATGACGCCCCG
CGTCCGCCGCTACAACGACTCGACGCGATGCGGGAAGCCGCCGAGCGACGTCGCGCGGCG
CCCAAGCGTCGCCTGGACGACGCCTCGCACCACAATCCCAAGCACGCCGCGCTGCTCGCC
GACCATGGAGTGGACTACGACGCTCCTCCTTCACCGATGGAGGTGGCCACACGACGAGCG
GAGCGTATCGCGAAGGAGAAGATGAAGGTCGGCGCGAGCGCTTCCAACGCCGGGAACGTC
GCGCCGCCGCCGGCCGCCGCCAGCGGCGCGCCTCCGCCCGTCACCGCACAGCGTATAGTA
GTGGCGGCGCACGGGGCTCCGGCAGCGGCCGCGGCGGCGCCCGGGCCCGGCAAGCCGGAG
GTCCGCCGTCCGCGGCCGGGGGAGGCTCCGCGAGCTCAGGCGCCGGCCGCCGCACAGCTG
CTGTACCGCCAGCAGACGCTCGCCGGCAGGCACCATCTGAAGATATTGCACCACTCGACA
CCGACCCAGCCGCAGGTAGGGCCGCGCCGGGGACTGCGGCGCTAG
Protein sequence:
VRSPPRQPAAHGRGQRAPLLAPAPVRRGLARGGGRGSASLAAAGYLGRAPRPARRHRQVH
DLLVVVPGARAPDVGGRGGGGAGLAAGGAPPPRAGLRAARAALTLLHVPAARAAVAFPHP
RLLQYDCGKLQTLDGLLRRLKAGGHRVLIFTQMTRVLDVLEAFLCMHGHAYLRLDGATRV
DQRQPLVDRFNADPRIFAFILSTRSGGVGLNLTGADSVVFYDSDWNPTMDAQAQDRCHRI
GQTRDVHVFRLVTTATVEENILRKAEQKRTLGHLAIEDGHFTTSYLRAANIKELFGAETE
PTAGQRDCESAEGGELESALAAAEDEADAAAAQAARAEAQGDLAEFDETVPLDEDTRAAS
PGHAGDEDRGEFAALMKQLTPVEKYAMRLVESSEAATEAERAALGEMRRQLREWEQARRA
LRDEASDQHEQETEPEHDQDLELTYCREDARTEIWIDGNGAAERMPMWCPPTPPSSDGDV
YCDSWARALYRRGAAADALLPPVRWRDSRAPRSPRRTRPAPRSAHAPPSLFDRGGPRPRP
RVRAPPAPPRDHVTPPPDWAPCEDAALRRALRLQRLPPEPPAAHAPNWDWLADLVGEVAR
AYRSPRSCRDRHDALADPERARRKHRKPPPARRRPDDDAPRPPLQRLDAMREAAERRRAA
PKRRLDDASHHNPKHAALLADHGVDYDAPPSPMEVATRRAERIAKEKMKVGASASNAGNV
APPPAAASGAPPPVTAQRIVVAAHGAPAAAAAAPGPGKPEVRRPRPGEAPRAQAPAAAQL
LYRQQTLAGRHHLKILHHSTPTQPQVGPRRGLRR