| New model in OGS2.0 | DPOGS207421 |
|---|---|
| Genomic Position | scaffold518:+ 95642-97517 |
| See gene structure | |
| CDS Length | 738 |
| Paired RNAseq reads | 30646 |
| Single RNAseq reads | 83771 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA009319 (7e-126) |
| Best Drosophila hit | ribosomal protein S3 (2e-99) |
| Best Human hit | 40S ribosomal protein S3 (1e-104) |
| Best NR hit (blastp) | RecName: Full=40S ribosomal protein S3 (7e-134) |
| Best NR hit (blastx) | RecName: Full=40S ribosomal protein S3 (1e-125) |
| GeneOntology terms | GO:0003684 damaged DNA binding GO:0003723 RNA binding GO:0003729 mRNA binding GO:0003735 structural constituent of ribosome GO:0003906 DNA-(apurinic or apyrimidinic site) lyase activity GO:0004519 endonuclease activity GO:0005515 protein binding GO:0005622 intracellular GO:0005634 nucleus GO:0005737 cytoplasm GO:0005829 cytosol GO:0005840 ribosome GO:0006412 translation GO:0006414 translational elongation GO:0006917 induction of apoptosis GO:0006919 activation of caspase activity GO:0006974 response to DNA damage stimulus GO:0012505 endomembrane system GO:0019901 protein kinase binding GO:0022627 cytosolic small ribosomal subunit GO:0030425 dendrite GO:0030529 ribonucleoprotein complex GO:0032088 negative regulation of NF-kappaB transcription factor activity GO:0032587 ruffle membrane GO:0045738 negative regulation of DNA repair GO:0051059 NF-kappaB binding |
| InterPro families | IPR015946 K homology domain-like, alpha/beta IPR001351 Ribosomal protein S3, C-terminal IPR018280 Ribosomal protein S3, conserved site IPR004044 K Homology, type 2 IPR009019 K Homology, prokaryotic type IPR005703 Ribosomal protein S3, eukaryotic/archaeal |
| Orthology group | MCL14977 |
Nucleotide sequence:
ATGGCGGTGAACAACATTTCCAAAAAGCGAAAATTCGTCGGGGACGGAGTGTTCAAGGCT
GAATTGAACGAGTTCCTTACTCGAGAGTTGGCCGAAGATGGCTACTCTGGCGTGGAGGTG
CGTGTCACTCCTACCCGATCAGAAATCATCATTATGGCTACCAGGACACAAAGCGTACTG
GGAGAGAAAGGTCGCAGGATCCGTGAATTGACGTCAGTTGTACAAAAGAGGTTTAATATC
CCCGAGCACTCAGTCGAGCTTTACGCCGAGAAGGTCGCCACCCGCGGTCTCTGTGCCATC
GCTCAAGCTGAATCCCTACGTTACAAACTCATTGGAGGATTGGCCGTCCGTCGTGCGTGC
TACGGTGTGCTGAGATTCATCATGGAATCTGGTGCTCGTGGCTGTGAAGTCGTAGTCTCC
GGCAAGTTGAGAGGTCAGAGAGCTAAGTCTATGAAGTTTGTGGATGGACTCATGATCCAC
TCGGGAGACCCCTGCAATGACTACGTTAACACCGCCACCCGACATGTACTGCTCAGACAA
GGAGTACTTGGTATTAAGGTGAAGATCATGTTACCGTGGGACCAACAAGGCAAGAACGGA
CCCAAGAAGCCCCAGCCGGACCACATCTTGGTGACGGAGCCCAAGGACGAGCCCGCGCCC
CTGGAGCCCACCTCGGACGTGAGGTCGTTGGCCCCGGTGCCCGCCGCCGCACCAACGCCC
GCGCCTGTCGCTGTCTAG
Protein sequence:
MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPTRSEIIIMATRTQSVL
GEKGRRIRELTSVVQKRFNIPEHSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRAC
YGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQ
GVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPAPLEPTSDVRSLAPVPAAAPTP
APVAV