| New model in OGS2.0 | DPOGS213636 |
|---|---|
| Genomic Position | scaffold543:- 173162-182641 |
| See gene structure | |
| CDS Length | 1746 |
| Paired RNAseq reads | 2261 |
| Single RNAseq reads | 7681 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA004577 (4e-86) |
| Best Drosophila hit | scavenger receptor class C, type I (1e-35) |
| Best Human hit | MAM domain-containing glycosylphosphatidylinositol anchor protein 2 isoform 1 (1e-25) |
| Best NR hit (blastp) | scavenger receptor SR-C-like protein [Spodoptera frugiperda] (1e-103) |
| Best NR hit (blastx) | scavenger receptor SR-C-like protein [Spodoptera frugiperda] (1e-100) |
| GeneOntology terms | GO:0005044 scavenger receptor activity GO:0006955 immune response GO:0030247 polysaccharide binding GO:0005887 integral to plasma membrane GO:0006952 defense response GO:0006909 phagocytosis GO:0009617 response to bacterium GO:0050829 defense response to Gram-negative bacterium GO:0016020 membrane |
| InterPro families | IPR016060 Complement control module IPR000436 Sushi/SCR/CCP IPR000998 MAM domain IPR001212 Somatomedin B domain IPR008985 Concanavalin A-like lectin/glucanase |
| Orthology group | MCL12964 |
Nucleotide sequence:
ATGTTGATTTTGACATTTGTTAAAAATGCACGTCATTTTCTAGGGCCTGGATGTGCTCGG
CCGAATTTTGAAAATGGTATCCAGATCCCCACGAGTAACGGAGCTTGGGTGACACACTTC
TGTCTCCCGGGGTACAAGCTGGTGGGATCTTCGGTCATTTACTGTAACGGAAGACAGTGG
AACGCTACACCTCCGATATGTATCGACTCGTCAGAAGATAGTTCTCCAGCGTTAAGCTGT
GACTTCGAGGAGCCAGATCTCTGCGGCTGGACTCAGGACGAGATGCACGACTTCGACTGG
ACCAGGTTCAATAAGAAAACCCCGAGTTCGTTCCTGTTGACCGGACCTTCTTATGACCAC
ACCATCGGAAAAAACGGTTCGGGTTATTATATGTACATCGAGAGTACATCGCGTCTTAAG
AACGACACCGCCAGGTTCATGTCACCGGTCTACAGCCAGAGCCTGTCTGAAGACGGCTGC
TTCTCCTTCTTCTATCACATGTTCGGAAACACGATCGGTGGTCTCCGCGTGTACCAAAAA
CCTGACAAACTTCCAATGGCTGTTTTACTCAACTTGAGTGGTTCCCAAAGAGATCAGCAC
ATCTTGTTCGAGAAGTGGGGCAACCAAGGTGACCAGTGGTACAGCTCCGTATCAGATTTA
AGGAACCTGGGGGATAACTTTCAGATCATCATCGAAGGTATCCGTGGGACCAGCTTCACC
AGTGACATAGCCATCGACGACGTCGCTATACTCCAAGGAGAGAACTGCACCGCCGCCAAG
AACAGGGCCACCACACCATCCACAGCTTACATGCCGGAGTCCTGTCAGGGTCGTTGCATG
GAACCCTCGACCAGCTTGTGTGGCTGCACCTACAGCTGCCTCACTGACGAAGACTGCTGC
CACGACTTCTTCGAGTTGTGCGTCTTTAAGCAAGATTTAACAACCACAACAGACGATATC
GTGGTGGCGAACAGTTCGTATGACAGACCTCAAAAACAGAAACTGATAGCATCTCCCCCA
GACTCTACTTTAAGTACAACGACATCGACTACTTCTACTACAACCACCACAACTACGATG
AAGACTACCTTAACAACCAGGACTACAACAACTCCCAAACCTACAACTACTTCTACATCC
ACAACAACAACTACTACTACACGCAAACCTACAACAGTTCCCAAAACTACTACAACATCT
AAACCTGCAACAACTAGAAAACCTCAAACCACTACACAGAAAACCACAACAATAACACCC
AAACCAATCCGACCCAATAAACCCAAACCAATCCGACCCAATAAACCCGAACCACCAACA
CCTAACAAACCTACACCTACTACCATCAAAACATCTATTATACCATCGACCAGTACTTCT
ACTACAACTTCTACAACTACATCAAGCCCATCGACATCCTCTGTTCGAGTAACTCCTGTC
CTGGAACATGGAATATCCAGAACGATAGAAAACCACAACCAATACCACGAGATGGTAGAA
AAGGCTAAGAAGGAACAAAAAATAGAAGTCAGAAGGCTTCATAATATGAGCAAGGAAGAA
AATCAATCATCAGGCTGGAGGGTGGTGCTTATAATACTAGGTACTATCATATGTGTCGCT
ATCGTGTCGTGGACGGTGGTCGTGTCGCGGTCGGCCCGCGGCCGTCTCGCTATAGCCAGG
TTCAGAGGTCGCTGCAGCCAAGACCCAGAAGTTAGATATCTCTCCACAGATGTTGATGAT
GATTAA
Protein sequence:
MLILTFVKNARHFLGPGCARPNFENGIQIPTSNGAWVTHFCLPGYKLVGSSVIYCNGRQW
NATPPICIDSSEDSSPALSCDFEEPDLCGWTQDEMHDFDWTRFNKKTPSSFLLTGPSYDH
TIGKNGSGYYMYIESTSRLKNDTARFMSPVYSQSLSEDGCFSFFYHMFGNTIGGLRVYQK
PDKLPMAVLLNLSGSQRDQHILFEKWGNQGDQWYSSVSDLRNLGDNFQIIIEGIRGTSFT
SDIAIDDVAILQGENCTAAKNRATTPSTAYMPESCQGRCMEPSTSLCGCTYSCLTDEDCC
HDFFELCVFKQDLTTTTDDIVVANSSYDRPQKQKLIASPPDSTLSTTTSTTSTTTTTTTM
KTTLTTRTTTTPKPTTTSTSTTTTTTTRKPTTVPKTTTTSKPATTRKPQTTTQKTTTITP
KPIRPNKPKPIRPNKPEPPTPNKPTPTTIKTSIIPSTSTSTTTSTTTSSPSTSSVRVTPV
LEHGISRTIENHNQYHEMVEKAKKEQKIEVRRLHNMSKEENQSSGWRVVLIILGTIICVA
IVSWTVVVSRSARGRLAIARFRGRCSQDPEVRYLSTDVDDD