| New model in OGS2.0 | DPOGS212856 |
|---|---|
| Genomic Position | scaffold96:+ 124825-125542 |
| See gene structure | |
| CDS Length | 369 |
| Paired RNAseq reads | 45 |
| Single RNAseq reads | 500 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA000800 (3e-64) |
| Best Drosophila hit | AP-2sigma (6e-63) |
| Best Human hit | AP-2 complex subunit sigma isoform AP17 (5e-62) |
| Best NR hit (blastp) | PREDICTED: similar to clathrin-associated protein 17 [Monodelphis domestica] (1e-64) |
| Best NR hit (blastx) | hypothetical protein TcasGA2_TC009991 [Tribolium castaneum] (2e-65) |
| GeneOntology terms | GO:0005515 protein binding GO:0005794 Golgi apparatus GO:0005829 cytosol GO:0005886 plasma membrane GO:0005905 coated pit GO:0006886 intracellular protein transport GO:0008565 protein transporter activity GO:0016192 vesicle-mediated transport GO:0030117 membrane coat GO:0030121 AP-1 adaptor complex GO:0030122 AP-2 adaptor complex GO:0030666 endocytic vesicle membrane GO:0050690 regulation of defense response to virus by virus |
| InterPro families | IPR011012 Longin-like IPR000804 Clathrin adaptor complex, small chain IPR016635 Adaptor protein complex, sigma subunit IPR022775 AP complex, mu/sigma subunit |
| Orthology group | MCL15531 |
Nucleotide sequence:
ATGAATTTTGATGATGATGAGAAACAGAAATTAATAGAAGAAGTTCACGCTGTTGTTACA
GTTCGTGACGCCAAACATACCAACTTCGTGGAATTTAGAAACTTCAAGATAGTGTACAGA
AGATATGCTGGACTATACTTCTGTATATGTGTGGACGTGAATGACAACAACCTCTGCTAT
CTTGAAGCTATCCACAATTTTGTTGAAGTGCTCAATGAATACTTCCACAACGTGTGTGAA
CTCGATCTTGTATTTAACTTCTATAAGGTGTACACAGTGGTGGATGAAATGTTCCTCGCT
GGTGAGATCCGGGAGACGTCCCAGACCAAAGTCCTGAAGCAATTGCTGATGCTCAACTCC
TTAGAGTGA
Protein sequence:
MNFDDDEKQKLIEEVHAVVTVRDAKHTNFVEFRNFKIVYRRYAGLYFCICVDVNDNNLCY
LEAIHNFVEVLNEYFHNVCELDLVFNFYKVYTVVDEMFLAGEIRETSQTKVLKQLLMLNS
LE