New model in OGS2.0 | DPOGS215399  |
---|---|
Genomic Position | scaffold2795:+ 8351-12505 |
See gene structure | |
CDS Length | 900 |
Paired RNAseq reads   | 27 |
Single RNAseq reads   | 82 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA012432 (2e-104) |
Best Drosophila hit   | CG10026, isoform B (3e-31) |
Best Human hit | clavesin-2 (1e-22) |
Best NR hit (blastp)   | PREDICTED: similar to CRAL/TRIO domain-containing protein [Nasonia vitripennis] (2e-50) |
Best NR hit (blastx)   | PREDICTED: similar to CRAL/TRIO domain-containing protein [Nasonia vitripennis] (9e-51) |
GeneOntology terms    | GO:0008431 vitamin E binding GO:0016918 retinal binding GO:0006810 transport GO:0005622 intracellular GO:0005215 transporter activity |
InterPro families    | IPR001071 Cellular retinaldehyde binding/alpha-tocopherol transport IPR001251 Cellular retinaldehyde-binding/triple function, C-terminal IPR011074 Phosphatidylinositol transfer protein-like, N-terminal |
Orthology group | MCL40748 |
Nucleotide sequence:
ATGCCGTTCATAGACATAGCGTTCCAGGCTGAAGTCAGCAGGTTTGAGGACCAGGAGTTC
GAGGAGTGCGCCAGGAGGAACTGCTCCGAGGACCCAGAGACCAGGCAGACAGCCATTCAC
AACCTACGGAACCTTATATACCAACGTGGTGAGTGTAATCCGAGAAGACTAGACGACGCG
TACCTCCTGCGATTCCTGAGATGCAGGAGATTCATACCAGCTCTGGCACACAAACTGATT
GTCCGATACGAAGAGTTCCGTCGCAAGAACTCCTACTTGTATGACTGCAAGGCCTTCGGT
CTCCAGAAGGTGAAGGGGGTATACGGAGGCACCCTGCCGGAGAGTCCGCACCACGGCAGG
ATCACACTCATGAGGTTCGGTCGTTGGGACACGGAAGCCGTCCCCGTGGTGGACGTGGTC
CGTTGCGCTCTGCTGATGGACGAGATCGCGGTCATGCAGCCCAAATTACAAATCCTAGGC
GTCACCATCATAGTCGACCTCGAGGGTCTCAGTGTGAGACATGTCAGACACCTCACACCC
ACTATAGCGCATCAGATCGTCAGCCTCATGGGGGTGTCCTTCCCCCTGCTGCTGCACGGC
CTCCATATAGTCCGCTACAACTGGATCCTGAACACTTTCTTCTACGTGTTCAAGCAGTTC
ATACCGACTGCGGCCTGGGAGAGGGTCCATTTCCACGGACACGACATGGCCTCCCTCCAC
AGACACATACCCCCCGAGTACCTCCCGCCGGAGTACGGGGGCTGCTGCCCTCACGTGGTG
GAGGTCGACGAGTGGGTCAGGAAGGTCGACAGGTTCAAGGACGACTTCATGGTCAACGAG
CTCAGGGAGCTGGGCTTCACCGTCGACGATCAGCAGTATAATAAATTATATGAAATATGA
Protein sequence:
MPFIDIAFQAEVSRFEDQEFEECARRNCSEDPETRQTAIHNLRNLIYQRGECNPRRLDDA
YLLRFLRCRRFIPALAHKLIVRYEEFRRKNSYLYDCKAFGLQKVKGVYGGTLPESPHHGR
ITLMRFGRWDTEAVPVVDVVRCALLMDEIAVMQPKLQILGVTIIVDLEGLSVRHVRHLTP
TIAHQIVSLMGVSFPLLLHGLHIVRYNWILNTFFYVFKQFIPTAAWERVHFHGHDMASLH
RHIPPEYLPPEYGGCCPHVVEVDEWVRKVDRFKDDFMVNELRELGFTVDDQQYNKLYEI