| New model in OGS2.0 | DPOGS206875 |
|---|---|
| Genomic Position | scaffold1:- 1866003-1876105 |
| See gene structure | |
| CDS Length | 840 |
| Paired RNAseq reads | 2250 |
| Single RNAseq reads | 7193 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA012833 (8e-16) |
| Best Drosophila hit | RNA-binding protein 2, isoform B (5e-25) |
| Best Human hit | eukaryotic translation initiation factor 4H isoform 1 (1e-20) |
| Best NR hit (blastp) | PREDICTED: similar to RNA-binding protein 2 CG4429-PA, isoform A [Apis mellifera] (4e-49) |
| Best NR hit (blastx) | eukaryotic translation initiation factor 4H [Bombyx mori] (6e-48) |
| GeneOntology terms | GO:0003729 mRNA binding GO:0003743 translation initiation factor activity GO:0006413 translational initiation GO:0005829 cytosol GO:0003676 nucleic acid binding GO:0000166 nucleotide binding GO:0005875 microtubule associated complex |
| InterPro families | IPR012677 Nucleotide-binding, alpha-beta plait IPR000504 RNA recognition motif domain |
| Orthology group | MCL13525 |
Nucleotide sequence:
ATGGCAGGTCGCAGTGGTTTTGACGATGGTAATCCGAGGGACTATGGAGGCGGCAGGAGA
ACTGTGGGCGGCCGTCCTCTCCCAACCGAACCACCATACAAGGCCTACGTTGGGAACTTA
CCCTCTGGTCTCATTCAAGGCGATATTAACAGAATCTTTCCAAATCTGGCCGTTAAAAAT
GTCCGGCTGGTTATGGATAAGGAAACAGATCTATTCAAAGGATTTTGCTATGTGGAATTT
GAGTATCTCAATGATCTCATAAAAGCAATCGAAATGAATGGTTCTCTAAAGGTAGATGAT
AAATTTGTAAAAATTGATGTTGCGGAAGAAAAAAGGAATGATAGAGGAGGTGGCTTCGAT
CGGGGCAGACGCGAGGGTCGTGATGGCGGGAGGGACGGTCGTGGTGGGTTCCGGCGAGAG
GGAGGTGGCCGTGGTACGTACGACGACAGGAGGACCCCGGGGTTCACACATGAACGCGAG
CGTGGCGGCGGGGCGAGCGGGGAGCGATGGAACGACCGTGGCGGGGAGCGGCCGGAGCGC
GGGGGTGAGAGGTGGAATGAGCGCGGCGGGGAGAGGGGTGCGAGAGGGGGCAGTGAGGAA
CCCCGCGGGGGAGACTGGGGGAGGATGGGGAGACAGCCGTCAGCACCCAGGCAGCAGCCA
CGTCGCTTTGACGACATGCCGCCAGCCAGAGCCGACACATCAGGTAGACCGAAGCTGGTA
CTGGAGCCGCGGACGGTGAAGGAGCCTGTCAACTCGCTGGCTGCCACAAGCCAGGCCTCC
TCTATATTCGGCGGCGCCCGGCCGAGGGAGGAACGACTCAAAGAACTCGCCGAGGAATAG
Protein sequence:
MAGRSGFDDGNPRDYGGGRRTVGGRPLPTEPPYKAYVGNLPSGLIQGDINRIFPNLAVKN
VRLVMDKETDLFKGFCYVEFEYLNDLIKAIEMNGSLKVDDKFVKIDVAEEKRNDRGGGFD
RGRREGRDGGRDGRGGFRREGGGRGTYDDRRTPGFTHERERGGGASGERWNDRGGERPER
GGERWNERGGERGARGGSEEPRGGDWGRMGRQPSAPRQQPRRFDDMPPARADTSGRPKLV
LEPRTVKEPVNSLAATSQASSIFGGARPREERLKELAEE