| New model in OGS2.0 | DPOGS212398 |
|---|---|
| Genomic Position | scaffold741:- 3971-35152 |
| See gene structure | |
| CDS Length | 2370 |
| Paired RNAseq reads | 2457 |
| Single RNAseq reads | 5917 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA012081 (1e-134) |
| Best Drosophila hit | Snf5-related 1 (1e-81) |
| Best Human hit | SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 isoform a (5e-74) |
| Best NR hit (blastp) | PREDICTED: similar to ENSANGP00000012094 [Nasonia vitripennis] (8e-86) |
| Best NR hit (blastx) | PREDICTED: similar to ENSANGP00000012094 [Nasonia vitripennis] (7e-83) |
| GeneOntology terms | GO:0016251 general RNA polymerase II transcription factor activity GO:0045449 regulation of transcription GO:0005634 nucleus GO:0003702 RNA polymerase II transcription factor activity GO:0045893 positive regulation of transcription, DNA-dependent GO:0035060 brahma complex GO:0003713 transcription coactivator activity GO:0002165 instar larval or pupal development GO:0001700 embryonic development via the syncytial blastoderm GO:0070984 SET domain binding GO:0008285 negative regulation of cell proliferation GO:0000228 nuclear chromosome GO:0006338 chromatin remodeling GO:0007474 imaginal disc-derived wing vein specification GO:0008544 epidermis development GO:0007517 muscle organ development GO:0048813 dendrite morphogenesis GO:0008586 imaginal disc-derived wing vein morphogenesis GO:0008587 imaginal disc-derived wing margin morphogenesis |
| InterPro families | IPR000195 Rab-GAP/TBC domain IPR006939 SNF5/SMARCB1/INI1 |
| Orthology group | MCL15964 |
Nucleotide sequence:
ATGGAGGTTAGGACGTTCCCGCTCTGCTTCGATGACACCGACATGACCGCCATGTTGGAG
AACGCTTCTCAGAAGCAAGTGCTCGTACCCATCAGATTGGACATGGAAATCGAAGGCCAG
AAGCTCAGGGATACATTCACATGGAACAAAAATGAGTCTATTATAACACCGGAGCAGTTT
GCTGAAGTCCTGTGCGACGATTTGGAACTGAACACCAGTACGTTCATCCCGGCCATAGCC
TCGTCCATCAGACAGCAGATCGAGGCTTTCCCCAGTGAACCACCTCCCATACTCGAGGAG
TTGGACCAGAGAGTCATCATCAAACTCAATATACACGTCGGGAACACGTCTCTGGTCGAT
CAGGTGGAGTGGGATATGGCTGAGAAGGAGAACAATCCGGAACAGTTCGCCATGAAGCTG
TGCGCCGAGCTCGGCCTGGGCGGGGAGTTCGTGACGGGAATCGCTTACAGTGTCAGGGGA
CAACTTAGCTGGCATCAGAGGACCTACGCCTTCAGCGAGGCCCCGTTACCTGTCGTTGAG
GTTTTGACACAAGTGTCACAGATTGCTGAACTAATGTCTCAGCAACCGTACATTAAAGCT
GTGTACACAAGTGACATCAAGGACACATCATTGGATTGGATTACAGTAGCAGTATTAGAT
AGGGGCCCCTTAAACCTACACCTGGGTCACAAGTCCCAGGAACTGTTTACGCTCCTCTCC
ATGCAACGCGATGGAATCGGCACCCGCACGGTGAATCCATTAAATGCTACAGGCGTTTTC
CCTTGGAAGAGCAGTTCATCGAAGAACCATGACTCGTCGCCGACGTCCTGGAGATTGTTC
GGCAGCAAGTCCAACACTAACCTGGCGAAGAGTCTGACAGCCGAGGTTCAGAAGTCATTG
ACTCCATCGTCCTCCGCGGCCACCACACCACACCACCACAAACGGCAGGGCAGCTCTGCC
AGCGAGAAGCAGTTTGATGACCTCGTCGCCAGCTCAATAGCCCTAATACAACATGACAGA
CCATCAAATCTGCCGGCAAAATGTACGGAGGAAGCCCTGCGTCACAAAGCGGAACACGCT
CGAATGGTTGAAGCGGCGAGACGAAGAGTGGAGCGAGAGGCTGCTGCAAGACATGCCAAG
ATGCAGGAGTCACTGAGGATGGAAGAGAGACTAGCGAGACACGCGCGGGAGTGGACGCAG
AACATACTCCCTGACTGGCAGAACATGAAAAATGCTAAACGAACTCAGGAACTTTGGTGG
AGCGGGCTACCACCGTCTGTAAGAGGCCGGGTGTGGCAACTGGCCATAGAGAACAAGCTT
AACATAACAGAGCAAATGTACCAAGATTATGTTGCCAAAGCAAAGCAGAAGTTACACGAG
GCGCAGTTGAGAAGGAAGCGATTAAAACTCAACAACTCCTGTCACTGTCGAGAAGACGAC
GCTAAAGATACGGAAGAAAAGATAACAAAAGATGCCAACAAGGAAGACAACGCGAAGAAG
ACGGACAAAACAAGAACTGACGATAGGAAGGATGAGAAAACTGAGAAACTGAGGTTGGGG
ATGCCGAGGAACTACAGCGAGCAGAACCTGAAGACCTTACACGTGGAGGCACCGAACAAG
TGCTGCTCGAAATCCAACCCTAATCTGTTGGAGTATAGTGACGAATGTTCCATGGAGCTG
ATACAGCTGGACATCTCGAGGACTTTCCCACACCTGTGTATTTTCCAGCCGGGAGGGCCG
TACTTCGACGTCCTACATGAATTGCTAGCGGCTTACGTGTGCTACAGACCGGATATAGGA
TATGTACAGGGTATGTCGTTCATAGCGGCCGTGTTGATACTGAACATGGAAGCGTCCCAG
GCGTTCATGTGTTTCTCCAACCTCCTGGAATGGCCGGTGCTGAGGGCCGCCTTCACTAGA
GACGGCGCCACGATGCAGCGTCTATGGCGAGCGTACACGGCCGTCCTGTCTAGCGAGCTG
CCCCGTCTCGCGTCTGTGGTGGCCCCTGAGCTGTATCTGGTGGACTGGATCTACTCAGTG
TTTGCCAAACCGATGCCCCTAGACGCCGCCTGTCGAGTTTGGGACGTCCTGCTCAGAGAC
GGCGATCACTTCCTCTTCCACGTGGCCCTCGGGGTGCTACATTTATATCAGAACGAATTG
AAGGATATGGATTTCATATCAGCCGCTCAGTTTCTTACCAAATTGCCGGACGACCTGGAC
CCCGAGGCCCTCTTCAGGAGTATCTCCTCTACATCGTTGACAGCAGACGGCCTGACCTTC
GAAGAGCTCGTCACCAACTGCCAAATAGACGAAGAAGACAGCTGTACGCCAACGCTGCCA
GTCGCGTGGTTCTTGCCGAGCGGCGCGTAA
Protein sequence:
MEVRTFPLCFDDTDMTAMLENASQKQVLVPIRLDMEIEGQKLRDTFTWNKNESIITPEQF
AEVLCDDLELNTSTFIPAIASSIRQQIEAFPSEPPPILEELDQRVIIKLNIHVGNTSLVD
QVEWDMAEKENNPEQFAMKLCAELGLGGEFVTGIAYSVRGQLSWHQRTYAFSEAPLPVVE
VLTQVSQIAELMSQQPYIKAVYTSDIKDTSLDWITVAVLDRGPLNLHLGHKSQELFTLLS
MQRDGIGTRTVNPLNATGVFPWKSSSSKNHDSSPTSWRLFGSKSNTNLAKSLTAEVQKSL
TPSSSAATTPHHHKRQGSSASEKQFDDLVASSIALIQHDRPSNLPAKCTEEALRHKAEHA
RMVEAARRRVEREAAARHAKMQESLRMEERLARHAREWTQNILPDWQNMKNAKRTQELWW
SGLPPSVRGRVWQLAIENKLNITEQMYQDYVAKAKQKLHEAQLRRKRLKLNNSCHCREDD
AKDTEEKITKDANKEDNAKKTDKTRTDDRKDEKTEKLRLGMPRNYSEQNLKTLHVEAPNK
CCSKSNPNLLEYSDECSMELIQLDISRTFPHLCIFQPGGPYFDVLHELLAAYVCYRPDIG
YVQGMSFIAAVLILNMEASQAFMCFSNLLEWPVLRAAFTRDGATMQRLWRAYTAVLSSEL
PRLASVVAPELYLVDWIYSVFAKPMPLDAACRVWDVLLRDGDHFLFHVALGVLHLYQNEL
KDMDFISAAQFLTKLPDDLDPEALFRSISSTSLTADGLTFEELVTNCQIDEEDSCTPTLP
VAWFLPSGA