| New model in OGS2.0 | DPOGS210029 |
|---|---|
| Genomic Position | scaffold3424:- 13710-14924 |
| See gene structure | |
| CDS Length | 1215 |
| Paired RNAseq reads | 201 |
| Single RNAseq reads | 522 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA000459 (3e-126) |
| Best Drosophila hit | CG13902 (1e-56) |
| Best Human hit | lysine-specific demethylase 8 isoform 2 (6e-61) |
| Best NR hit (blastp) | PREDICTED: similar to JmjC domain-containing protein 5 (Jumonji domain-containing protein 5) [Tribolium castaneum] (1e-98) |
| Best NR hit (blastx) | PREDICTED: similar to JmjC domain-containing protein 5 (Jumonji domain-containing protein 5) [Tribolium castaneum] (4e-94) |
| GeneOntology terms | GO:0000086 G2/M transition of mitotic cell cycle GO:0003674 molecular_function GO:0003682 chromatin binding GO:0005575 cellular_component GO:0005634 nucleus GO:0008150 biological_process GO:0045893 positive regulation of transcription, DNA-dependent GO:0051864 histone demethylase activity (H3-K36 specific) GO:0070544 histone H3-K36 demethylation |
| InterPro families | IPR003347 Transcription factor jumonji/aspartyl beta-hydroxylase IPR013129 Transcription factor jumonji |
| Orthology group | MCL16319 |
Nucleotide sequence:
ATGACTACTTTACAAGATATTTATGATAAAATTGAAGAATTTAAGCCAGTTGTGATATCA
TCGTTAAAGGAAATTTCTGAACTGGATATAACATGTAAATCAATAATTGAGGAACAATTA
AATAATAGCAATTTACTGAATGCGACATCGATAATTAAAATCCAAGCTGTCATTGATTAT
ATGTATGAACATGTTAATATAGGAAATTGGAAAGAAGTGAGGTTATACTTAAGAAAAACT
ATAACGATTGCGTCTTATGTGCGCCTTCTGGGCCATTTAAAATGTAGTACCCTTCTGACT
AATGATGTGATTAAAGAAGGGCTAAAAATAATTGATTTTGGCATACTATTTGGTTGTCCT
ATGGAGACAGAACCTACATTGCTTCAAGACTGTGCATCATATCTTCATAACGCTCTCACA
CCCGATGATCTAAAACCCGAAGGAAATATACAAACTGGTTTGACTAGTGATATGGAATTA
AAAAATAAATCATTTAATTGTACCGTCTTAGATGTTATTGACTGCCCCAGTATGGAAACA
TTTTTGAAAAATTACATTCTCGCTGAGAAACCAGTTGTTTTAGATAATTGTATCAATCAT
TGGCCAGCATTAACTAAATGGCAGGATCAGAACTATTTTATCAAATTGGCTGGTCTCAGA
ACTGTTTCTATTGAATTAGGAAGAGACTACACTGATTCAAATTGGACACAGAAGTTGATG
ACATTAGAAGACTTCATTAGAAATCATATATTTGCTGAAGGAGGGACCACAGGATATCTT
GCCCAGTATCAGCTCTTTGATCAAATTCCCGAGCTAAAAAATGATATTATTGAGCCAGAA
TATTGCTGCTTTTCTGAAGAAGATGAGGATGAACACATAGATATTATGGCTTGGTATGGA
CCAAAAGGCACTCTGTCTCCCCTGCATCATGACCCCAAAAAGAATTTACTTGCCCAAGTT
GTAGGTGAAAAACAAATCTTTCTTTTCTCGCCTGAAGATTCAGTATATTTATACCCACAT
GAACATGAATTGCTCAATAACACAGCCAGAATAGATCCAAGGAACCCAGACTTCAGAAAG
TTTCCAATGTACAAAGAGGCTAAAGGATACTGTTGTGTGCTACGTTCCGGCCAGATGTTG
TATATACCACCGAAGTGGTGGCATTTTGTGGAATCTTTGTCAGTCAGTTTTTCAGTTAGT
TTCTGGTGGGAATAA
Protein sequence:
MTTLQDIYDKIEEFKPVVISSLKEISELDITCKSIIEEQLNNSNLLNATSIIKIQAVIDY
MYEHVNIGNWKEVRLYLRKTITIASYVRLLGHLKCSTLLTNDVIKEGLKIIDFGILFGCP
METEPTLLQDCASYLHNALTPDDLKPEGNIQTGLTSDMELKNKSFNCTVLDVIDCPSMET
FLKNYILAEKPVVLDNCINHWPALTKWQDQNYFIKLAGLRTVSIELGRDYTDSNWTQKLM
TLEDFIRNHIFAEGGTTGYLAQYQLFDQIPELKNDIIEPEYCCFSEEDEDEHIDIMAWYG
PKGTLSPLHHDPKKNLLAQVVGEKQIFLFSPEDSVYLYPHEHELLNNTARIDPRNPDFRK
FPMYKEAKGYCCVLRSGQMLYIPPKWWHFVESLSVSFSVSFWWE