| New model in OGS2.0 | DPOGS209458 |
|---|---|
| Genomic Position | scaffold24:+ 76630-82965 |
| See gene structure | |
| CDS Length | 2220 |
| Paired RNAseq reads | 1965 |
| Single RNAseq reads | 5182 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA005838 (8e-133) |
| Best Drosophila hit | CG6686, isoform B (2e-58) |
| Best Human hit | U4/U6.U5 tri-snRNP-associated protein 1 (1e-44) |
| Best NR hit (blastp) | PREDICTED: similar to CG6686-PB, isoform B isoform 1 [Apis mellifera] (4e-146) |
| Best NR hit (blastx) | PREDICTED: similar to CG6686-PB, isoform B isoform 1 [Apis mellifera] (5e-109) |
| GeneOntology terms | GO:0000398 nuclear mRNA splicing, via spliceosome GO:0071011 precatalytic spliceosome |
| InterPro families | IPR005011 SART-1 protein |
| Orthology group | MCL11416 |
Nucleotide sequence:
ATGGGTTCGAAGAAACATAAAAAAGAATCGAAAAAGAGGAAGCACAGAAGTAGATCCAGG
TCTCCTTTGGATGGTGAAGAGCGTGAACGAAAGAGGCACAGGAAACACAAGGATCGCAAG
AAAGATCGCTCTCCGGATGTGGAGGAGGTGCCGGTGGACTCGCACCTGGAGCGCGAGGCG
GAACCCTCGCCCGCGCCCAGCAGCAGCTCCAGCGCTAGGAGACATGAAGGAAGAGACAAA
AGCCAGGAGTCGGAACGTGACTCGTCACCCACGCCCGCCTCGGGGTCGGCTCAGGAGAGT
CTCTCCATAGAAGAGACCAACAAACTGCGAGCCAAGCTGGGGCTGAAACCACTTGAAGTG
CCAGAGAAACCTGCCGACGACGGTAAGTTCAAGGATGACCTGGGAGAGTTCTACCACGTG
CCCGCCTCCAACATCGCCGCGCAGAAGAAAGCGGACAAGTTGAGAGAGAAGCTCGCCGAG
AGGAGGGACAAGAGGGACATCGACAACAAGTTACAGACCTCCCTGCTGGCCGAGGGTTCC
GATGATGAAGACGCCTCCGCCTGGGTCAGGAAGACGCGGGACATGGAGAAACAGAAGCAG
GAAGCCGCCAAGAGAGCGGCTCTGCTGGACGAGATGGACGAGGTGTTCGGTGTGGGCGCG
CTCGTGGCGGACGACCAGCACCGAGACCGACAGGAGGCCTACCACCAGGAACATCTCAAG
GGGCTGCGGGTGGCGCACACTCTGGACGCGTTGCCCGAGGAGCGCGAGACGGTGTTGACG
CTGGCGGACAAGGAGGTGCTAGCGGACGACGACGAGGATGTACTCGTCAATGTGAACATC
GTGGACGACGAGAAATATAAAAAGAACATCGAGGAGCGCAAGAAGGCCCGCACGGGCTAC
CAGGCCTACGACGAGGAGGCCGACATACAGGCCGCCCTGGGGTACAGCAGACCCGTGCTG
GCCAAGTACGACGACGAGATAGAACCCAGCAAGGGAGACAAGACCAGGGGCTTCTTCATA
GGAGACGAGGACGCGCTCATGGAGCAGAAACTGAAGGACATGATGCGTGCGGAACTGATA
GCGGGCGGTCCGGATAAAGTGCTGGAATCGCTCCAGAGCACCGGCCTCAGACCCGCCAGC
GACTACCTGCAGCCCGACGAGCTCCAGGCGAGGTTCAAGAAAGTTAAGAAGAAGGGCAAA
ATACGTAAGAAGGCCAAGCAGGAGCCCATAGACGTGGAGGAGCACGAGGCGGGCTCCGTG
CCTCTGGACACCGATGACACGGAGATCAGCCAGGAGGTGACTGCGCCTGTTCTGGACGAA
GACGAAGTGGAGGTGGACACGGAGTTACAGGCGGCGCTCCATCGCGCCAGGAGACTGAGG
CAGGGAGGGGACCAACACAGGACTCCTAAGCTGGAGGAGATCCTCCAACAAATTAAAGAA
GAGAAAACGGAAGAGAGTCAAGAAGCCGGGGGCAGCATGGTGCTGGATGCCACCGCCGAG
TTCTGTCGCACGCTCGGGGACATACCGACATACGGCCTGGCGGGGAACAGGGAACATACC
GCCGAGATCATGGACTTCGATCGCGAGGAAGCCGAGCCGGAGCCGGAGAGCGGAGCCAGC
GGCGGCGCCTGGAGCAGGGTCGACGTGCGCACAGACCGGCCTGCCGACCTCGAGCATGAA
GGAGCGTCGGGCGCCGGGCTGGAGGCAGAGCCCGCACTGGGGGCCGGCGTGGCGGGCGCG
CTGCGACTGGCGCTCAGCAAGGGCTATCTGGAGAGAGACGGCGCACTGCCCGCTCCTAGA
CCGACACGCTCCTCACTGGCCGCGCTCGCCGCGCTGCACTACTCCATCGAGGACAAGACT
TACGGCGAGGACGACAAGTACGGTCGGCGCGAGAGAGGAGGTCACTCGGGACCTCTGAGC
GAGTTCAGGGAGAAGAGTGACTTCAGACCCGACATCAAGCTGGAGTACGTCGACGACGAC
GGGCGACCGCTCTGTCCCAAGGAGGCCTTCCGCTACCTCTCCCACAAGTTCCACGGCAAG
GGACCCGGCAAGAACAAGCAGGAGAAGAGAATCAAAAAGGCCGTGCAGGAGGGACTGATG
AAGAAGATGAGTTCCACGGACACGCCTCTCAACACGTTACAGATGCTGCAGCAGAAACAA
CGAGAGACACAGTCGCCCTTCGTGGTGCTCAGCGGCGCCAAGAGAGACGCGCCCAACTGA
Protein sequence:
MGSKKHKKESKKRKHRSRSRSPLDGEERERKRHRKHKDRKKDRSPDVEEVPVDSHLEREA
EPSPAPSSSSSARRHEGRDKSQESERDSSPTPASGSAQESLSIEETNKLRAKLGLKPLEV
PEKPADDGKFKDDLGEFYHVPASNIAAQKKADKLREKLAERRDKRDIDNKLQTSLLAEGS
DDEDASAWVRKTRDMEKQKQEAAKRAALLDEMDEVFGVGALVADDQHRDRQEAYHQEHLK
GLRVAHTLDALPEERETVLTLADKEVLADDDEDVLVNVNIVDDEKYKKNIEERKKARTGY
QAYDEEADIQAALGYSRPVLAKYDDEIEPSKGDKTRGFFIGDEDALMEQKLKDMMRAELI
AGGPDKVLESLQSTGLRPASDYLQPDELQARFKKVKKKGKIRKKAKQEPIDVEEHEAGSV
PLDTDDTEISQEVTAPVLDEDEVEVDTELQAALHRARRLRQGGDQHRTPKLEEILQQIKE
EKTEESQEAGGSMVLDATAEFCRTLGDIPTYGLAGNREHTAEIMDFDREEAEPEPESGAS
GGAWSRVDVRTDRPADLEHEGASGAGLEAEPALGAGVAGALRLALSKGYLERDGALPAPR
PTRSSLAALAALHYSIEDKTYGEDDKYGRRERGGHSGPLSEFREKSDFRPDIKLEYVDDD
GRPLCPKEAFRYLSHKFHGKGPGKNKQEKRIKKAVQEGLMKKMSSTDTPLNTLQMLQQKQ
RETQSPFVVLSGAKRDAPN