New model in OGS2.0 | DPOGS215282  |
---|---|
Genomic Position | scaffold316:+ 191278-199688 |
See gene structure | |
CDS Length | 837 |
Paired RNAseq reads   | 351 |
Single RNAseq reads   | 1147 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA001461 (1e-53) |
Best Drosophila hit   | CG3823 (5e-35) |
Best Human hit | alpha-tocopherol transfer protein-like (6e-14) |
Best NR hit (blastp)   | PREDICTED: similar to CG3823 CG3823-PA [Tribolium castaneum] (7e-55) |
Best NR hit (blastx)   | PREDICTED: similar to CG3823 CG3823-PA [Tribolium castaneum] (3e-55) |
GeneOntology terms    | GO:0008431 vitamin E binding GO:0006810 transport GO:0005215 transporter activity GO:0005622 intracellular |
InterPro families    | IPR001251 Cellular retinaldehyde-binding/triple function, C-terminal IPR011074 Phosphatidylinositol transfer protein-like, N-terminal |
Orthology group | MCL39539 |
Nucleotide sequence:
ATGTCGGAGATATCAGAGAAACAAGCGAATTCCGTAGTACAGCTGAAAGAATGGGTAAAG
GGACAGCCACACTTACCACAGAATTTAGACGAGCATCTCCTACTACGATTCGCTCATAGC
TGTTACTACGACATGGACAAAGCGAAGACAACAGTGGAAACATTTTTCACAGTAAGAAAT
TCGTGTTCAGATCTGTTGACAAACAGAGATCCGAACTCGCATCACATGCAAAAGATAATG
AAAGTTATTAACATAGGACAATATGAATTATCAGATAACACATGTCTATGGCTCTGGCAG
ATCAATGACCCCGGTCTAGACACCTACGACTACACTTTAGACGCCAAGCTATTCTTCTTA
ACAACCGACGCATTTTTCATGAGCGACAAACATCTGTACGAATCGGACATCGTATTGATG
GACGTCAAGGACATCTCATTGAAGTTTATAACGAAATTGAATATTTCCGTAGCTAGAAAA
CTGGCCAAATACCAGGAGGACGCGATCCCAATAAGACTAAAACAGGTGCATGTGATAAAC
GCTCCATCGTTTATAGATAAAATATACGGAGTTCTGAAACCTTTTATGAGAAAAGAACAT
ACAGAAATGATACATTTCCACTCACCCAAATCTGAAACACTATTCAAATATATAAAGAAA
GAGGATCTGCCAGAAGATTATGGCGGTCTGAAACCTTCTCTGGCGGAGCTAACGGAGAAT
AGTTTGGAAAAAGTTATGAATAACAGAGAACAATTATTGGATGAAAATCTATGGCGAACG
AAAAAGAACGGGACGTCCGTGGATGAAGGCTCCTTCAGGAAGCTAGCTATAGATTAA
Protein sequence:
MSEISEKQANSVVQLKEWVKGQPHLPQNLDEHLLLRFAHSCYYDMDKAKTTVETFFTVRN
SCSDLLTNRDPNSHHMQKIMKVINIGQYELSDNTCLWLWQINDPGLDTYDYTLDAKLFFL
TTDAFFMSDKHLYESDIVLMDVKDISLKFITKLNISVARKLAKYQEDAIPIRLKQVHVIN
APSFIDKIYGVLKPFMRKEHTEMIHFHSPKSETLFKYIKKEDLPEDYGGLKPSLAELTEN
SLEKVMNNREQLLDENLWRTKKNGTSVDEGSFRKLAID