| New model in OGS2.0 | DPOGS207521 |
|---|---|
| Genomic Position | scaffold134:+ 19218-25064 |
| See gene structure | |
| CDS Length | 1857 |
| Paired RNAseq reads | 2007 |
| Single RNAseq reads | 5981 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA001882 (0.0) |
| Best Drosophila hit | I[[h]] channel, isoform G (0.0) |
| Best Human hit | potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2 (2e-138) |
| Best NR hit (blastp) | PREDICTED: similar to hyperpolarization-activated ion channel isoform 1 [Tribolium castaneum] (0.0) |
| Best NR hit (blastx) | PREDICTED: similar to hyperpolarization-activated ion channel isoform 1 [Tribolium castaneum] (0.0) |
| GeneOntology terms | GO:0005221 intracellular cyclic nucleotide activated cation channel activity GO:0005886 plasma membrane GO:0005244 voltage-gated ion channel activity GO:0055085 transmembrane transport GO:0006813 potassium ion transport GO:0005249 voltage-gated potassium channel activity GO:0016020 membrane |
| InterPro families | IPR018490 Cyclic nucleotide-binding-like IPR000595 Cyclic nucleotide-binding domain IPR005821 Ion transport IPR013621 Ion transport N-terminal IPR018488 Cyclic nucleotide-binding, conserved site IPR014710 RmlC-like jelly roll fold IPR003938 Potassium channel, voltage-dependent, EAG/ELK/ERG |
| Orthology group | MCL10436 |
Nucleotide sequence:
ATGCTTCTGCTGCTGGTGGCGAATCTGATCATCCTACCAGTGGCCATCTCATTCTTCAAC
GACGACCTCAGCACACGATGGATAGCCTTCAACTGTCTCTCGGACACGATATTTCTCATA
GACATCGTTGTTAATTTTAGAACAGGAATAATGCAGCAAGATAACGCAGAACAAGTGATA
TTAGACCCAAAGTTAATAGCCAAGCACTATTTGAGGACGTGGTTCTTTCTGGACCTCATT
TCTAGTATACCACTAGATTATATATTCCTTATCTTCAACCAGGATTTTAGTGAAAGTTTT
CAAATTCTCCACGCCGGCCGCGCCCTAAGGATACTGCGGTTAGCAAAACTTTTATCTCTG
GTGCGACTGCTGCGACTCTCCAGGCTCGTTCGATATGTATCACAATGGGAGGAAGTATAT
ATGAGCCCCGCTCCGCAGCCGAGCGACGAGCCGGGTGACACGGAGGGCGGCGGCTCGCGC
GACCTCGCCTCGCAGATCTTGCAGAATCTTCAAAAAAAGCGCACGGAACGCAGGGGACGT
CTCAGCTCGGACGTTGCAAAAAAGAAGGGTGACACCAAAAGCAATCTGATCTTTAAGTTC
CTTAATATGGCATCGGTCTTCATGCGGATATTCAATTTGATCTGCATGATGCTGCTGATC
GGTCACTGGTCGGGATGCCTTCAGTTTCTTGTTCCTATGCTGCAAGGATTTCCACCAAAT
TCCTGGGTTGCAATCAATGAGTTACAAGAGGCTTTCTGGTTGGAGCAATACTCTTGGGCG
TTATTCAAGGCTATGTCTCACATGCTTTGCATCGGGTATGGTCGTTTTCCACCTCAGTCT
CTCACTGACATGTGGCTGACCATGTTGTCCATGATCTCCGGAGCCACGTGCTACGCCCTC
TTCCTCGGTCACGCCACCAATCTCATTCAGAGTCTTGACTCCTCCCGAAGGCAATATCGT
GAAAAGGTTAAACAAGTTGAAGAATATATGGCGTACAGAAAGCTACCCCGTGAGATGCGA
CAGCGCATCACTGAATACTTTGAACATCGCTACCAGGGGAAATTCTTCGACGAGGAATTG
ATTTTGGGCGAACTAAGCGAGAAACTGCGGGAAGACGTCATCAATTACAACTGCCGGTCG
CTGGTCGCCTCTGTTCCGTTCTTTGCTAATGCCGATTCGAATTTTGTTTCGGATGTTGTC
ACTAAATTGCGATATGAAGTCTTCCAGCCAGGTGACATCATCATTAAAGAAGGTACCATC
GGAAATAAAATGTACTTTATTCAAGAGGGTATCGTGGACATTGTTATGGCCAATGGAGAA
GTGGCGACCAGTTTATCGGACGGGTCCTACTTTGGTGAAATTTGCCTCCTGACCAATGCC
CGGCGAGTTGCTTCCGTCCGCGCCGAAACCTACTGTAATCTGTTCTCATTGTCCGTCGAC
CACTTCAACGCCGTGCTCGACCAGTACCCTCTGATGCGACGCACGATGGAGAGCGTCGCC
GCCGAGCGATTGAATAAGATCGGGAAGAACCCTAACCTGGTGGCGCACCGGGAAGACGAC
ACCACCTCGGAGGGGAACACCATCAACGCGGTGGTGAACGCGCTGGCCGCGGAGGCTGAA
CACGTCAGCCTCTCGGACGACAGCGTGGCGCGGCTGTCGGAGCGCTCGCTAGGGTTGGCG
TTGCAGCCTCTGCAAGCTGCGTCGTGCCGCATGGCCGGCGTGGCGCTGCCCGGACTGGGC
GTGGCGGCCCTACCGCGCCCCAAGTCCGAGCACGACTTCAGCTCGGCGCAGACGCAGGTG
CCGCCGCTGTCTTCAGCCGCCGCCTTCCACAAGTCGGACGCCGGCATCGCCCCCTGA
Protein sequence:
MLLLLVANLIILPVAISFFNDDLSTRWIAFNCLSDTIFLIDIVVNFRTGIMQQDNAEQVI
LDPKLIAKHYLRTWFFLDLISSIPLDYIFLIFNQDFSESFQILHAGRALRILRLAKLLSL
VRLLRLSRLVRYVSQWEEVYMSPAPQPSDEPGDTEGGGSRDLASQILQNLQKKRTERRGR
LSSDVAKKKGDTKSNLIFKFLNMASVFMRIFNLICMMLLIGHWSGCLQFLVPMLQGFPPN
SWVAINELQEAFWLEQYSWALFKAMSHMLCIGYGRFPPQSLTDMWLTMLSMISGATCYAL
FLGHATNLIQSLDSSRRQYREKVKQVEEYMAYRKLPREMRQRITEYFEHRYQGKFFDEEL
ILGELSEKLREDVINYNCRSLVASVPFFANADSNFVSDVVTKLRYEVFQPGDIIIKEGTI
GNKMYFIQEGIVDIVMANGEVATSLSDGSYFGEICLLTNARRVASVRAETYCNLFSLSVD
HFNAVLDQYPLMRRTMESVAAERLNKIGKNPNLVAHREDDTTSEGNTINAVVNALAAEAE
HVSLSDDSVARLSERSLGLALQPLQAASCRMAGVALPGLGVAALPRPKSEHDFSSAQTQV
PPLSSAAAFHKSDAGIAP