New model in OGS2.0 | DPOGS201094  |
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Genomic Position | scaffold1992:- 52424-62378 |
See gene structure | |
CDS Length | 1455 |
Paired RNAseq reads   | 4760 |
Single RNAseq reads   | 13615 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA007160 (3e-22) |
Best Drosophila hit   | lethal (1) G0156, isoform B (3e-153) |
Best Human hit | isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial precursor (7e-129) |
Best NR hit (blastp)   | isocitrate dehydrogenase [Aedes aegypti] (4e-165) |
Best NR hit (blastx)   | isocitrate dehydrogenase [Aedes aegypti] (2e-157) |
GeneOntology terms    | GO:0005759 mitochondrial matrix GO:0004449 isocitrate dehydrogenase (NAD+) activity GO:0005739 mitochondrion GO:0006099 tricarboxylic acid cycle GO:0051287 NAD or NADH binding GO:0000287 magnesium ion binding GO:0055114 oxidation reduction GO:0005811 lipid particle GO:0005875 microtubule associated complex |
InterPro families    | IPR001804 Isocitrate/isopropylmalate dehydrogenase IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site IPR004434 Isocitrate dehydrogenase NAD-dependent |
Orthology group | MCL13846 |
Nucleotide sequence:
ATGGCAGCGAGAATAATAAGAAAAATCCCTTTTCGTGAGAATAAAGTTGTATCAAGTATA
CTAAAATTATTCGAGTCGGGCTCAAATAATCCTTCGGGAGGGGTTGTGGGTGTGAAAAAT
GAGATCCCCGCGGGCCGGGCTGGTTCCGCTCAATACAGCACGGGGGTCCGTAAGGTGACA
CTCATCCCTGGACACGGGATCGGCCCCGAGATCACGGTAGCTGTACAGAAAATATTCGAA
GCCGCCAAAGTACCCATTGAATGGGACGAGGTGGACGTGACAGCTGTTAGAGGTCCGGAT
GGCAAATTCGGTATTCCCCAACGTGCCATTGATTCTGTCAATGCCAACAAGATAGGCCTC
AAAGGTCCCCTGATGACCCCAGTGGGTAAAGGATACAGGTCGTTGAACTTGGCTTTAAGA
AAAGAGTTTGATCTGTATGCCAATGTGAGGCCTTGCAAGAGTTTAGACGGCATCAAGACT
CTGTACGACAACGTGGACGTGGTGACCATCAGGGAGAACACGGAGGGAGAGTACTCCGGC
ATAGAACACGAGATAGTGGACGGCGTGGTTCAGTCCATCAAGCTCATCACAGAGGAGGCC
AGCAAGAGAGTGGCGGAGTTTGCGTTCACCTTCGCCAGGGACAACAAGCGGAAGAAGGTC
ACCGCCGTGCACAAAGCCAACATCATGCGTATGTCGGACGGCCTGTTCCTGCGCTGCTGC
CGCGAGCTGGCCACGCAGTTCCCCGACATCAAGTTCGAGGAGCGCTACCTGGACACCGTC
TGCCTCAACATGGTCCAGGACCCGTCCAAATTTGACGTACTCGTGATGCCGAATCTGTAC
GGAGACATCATGTCGGACATGTGCTCCGGCCTGGTGGGGGGCCTCGGCCTCACGCCGTCC
GGGAACATCGGCAAGAACGGAGCCCTGTTTGAATCGGTTCATGGCACAGCCCCGGCCATA
GCCGGCCAGGATAAGGCCAATCCCACAGCACTCCTCCTGTCCGGAGTCATGATGCTGAGA
TACATGAAGCTGGAAGACATCGCCGACAGAATAGAAACAGCCTGCTTCACCGTCCTGAAG
GAAGGGAGAGTCCTCACCGAGGACCTCGGGGGAAAGAGCTCATGCACGGAGTACACCAAC
GAGATCATCAAACATCTCTGTGATGAAAAGCCCTTCTCGACGGATCTGTTCTGTTCTTTG
CATGTACTTTCCTGGAAACTATGTTCTGTCCACGGCACGGCCCCGGACATCGCTGGGAAG
GATTTGGCCAATCCTACAGCTTTACTCCTCTCCGCTATCATGATGTTAAGGCATTTACAG
CTCAACGAACACGCGGATAGAGTCCAAAACGCCTGCCACGAGGTCCTGCGCGAGGGCAAA
TCTCTCACCGGTGATCTCGGCGGCACAGGAAAATGCAGTGAATTCACTAACGCCATCATA
TCAAAATTAAAATAA
Protein sequence:
MAARIIRKIPFRENKVVSSILKLFESGSNNPSGGVVGVKNEIPAGRAGSAQYSTGVRKVT
LIPGHGIGPEITVAVQKIFEAAKVPIEWDEVDVTAVRGPDGKFGIPQRAIDSVNANKIGL
KGPLMTPVGKGYRSLNLALRKEFDLYANVRPCKSLDGIKTLYDNVDVVTIRENTEGEYSG
IEHEIVDGVVQSIKLITEEASKRVAEFAFTFARDNKRKKVTAVHKANIMRMSDGLFLRCC
RELATQFPDIKFEERYLDTVCLNMVQDPSKFDVLVMPNLYGDIMSDMCSGLVGGLGLTPS
GNIGKNGALFESVHGTAPAIAGQDKANPTALLLSGVMMLRYMKLEDIADRIETACFTVLK
EGRVLTEDLGGKSSCTEYTNEIIKHLCDEKPFSTDLFCSLHVLSWKLCSVHGTAPDIAGK
DLANPTALLLSAIMMLRHLQLNEHADRVQNACHEVLREGKSLTGDLGGTGKCSEFTNAII
SKLK