| New model in OGS2.0 | DPOGS204413 |
|---|---|
| Genomic Position | scaffold406:+ 45723-55944 |
| See gene structure | |
| CDS Length | 4071 |
| Paired RNAseq reads | 1464 |
| Single RNAseq reads | 3637 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA007718 (6e-24) |
| Best Drosophila hit | fbl6, isoform C (4e-72) |
| Best Human hit | F-box/LRR-repeat protein 6 isoform 1 (1e-15) |
| Best NR hit (blastp) | hypothetical protein AaeL_AAEL013568 [Aedes aegypti] (1e-112) |
| Best NR hit (blastx) | hypothetical protein AaeL_AAEL013568 [Aedes aegypti] (3e-88) |
| GeneOntology terms | GO:0004842 ubiquitin-protein ligase activity GO:0006508 proteolysis |
| InterPro families | IPR006553 Leucine-rich repeat, cysteine-containing subtype IPR001810 F-box domain, cyclin-like IPR022364 F-box domain, Skp2-like |
| Orthology group | MCL16757 |
Nucleotide sequence:
ATGTCGGGCCGTTCGAGTCCCGTAAACGGCGGCTACGATGCTGCTGAGCCTGCTATGAGG
CTCTCGGTACGCAAGGATCTCTTTCCAGAAATTCGCTTGCTGAAAGGAACCTCCGTTTCA
GATACAGAATCTGAGACTGCACAAGACGAGCTCGAAGCTGTATCTTGTGTTAAACTGGAG
ACTGACTTCGAGAAGAGCATTGATGACATTGCTCAACAGAAGATGCAGGTGGTTAATGGA
GCGCTGCCGTCCCCGACACGGCCTCGCCACAGGAAACATAAGCAGCACTCCAAACGTGAT
TCAGACTATACGACTCATAATGGGTGTCCACCTAAGGAGAAGAAGAGGAAAAAGAGTTCT
CATGACTCTCGTAAATGGACACCTTCAAAAAATAGTATAGTGACGAAAGTGAAAGGTGGC
AAAAACTTAAACTTAGTGAGTAGTAGTGAGTATCAGGATGATGATGAAGGTGAAGTAGAA
GAAGATGAAAGTGATAGTTCTGAAGATGAAGTGTTAAAGAGTAGTGTAAAGTTACCGTTA
ATATCACGACAAAGTGGTAAACCTTACAGTCATGAACTTAGTCAATTATCAACAAAAAAG
AGTAAATCTAAGGAATCATCAAAGGAACAAAGGACTCGTATAGTGATACCTTGTAGTGGT
AAACCTCGTTCCATGTTGGGATTCTGTAGCTCCCGAAGCAAAAAGAAATCCAAGAAGTCT
GAAGTCACTCCCCCCACATATCAAAGCCAGATAGTGGATACTAGTACTAAACTAAAGATT
AAAATTAGAAGGACAAGCATTCAGGATGTGATAACTCCAGCTCCAGTATCAATAGCTGAT
ATCGGTCAAAGGAGGTCCAAGAAGAAGCGAGCGGTCTCACCTGCGGCTAGTGCTAGTTCT
GGTGAGGAATATGATCCCACGCGGGGTGACACGGCCGCCGTCATGAGTGTCGCAGCTACA
AAATCAAGGCAACCAAGGGCGAAGGTCAAAAAGTCCAATAATAATAACTCAAAAACTAAA
GATAAAGCTCAAAAGACTGAAAGAACTAGAGGTAGTGCTGTGGATAAAGGGAGTAAACCA
CAAAGTCCGTGGGCACATTCCATGCCTGAGGAGTTATTAGTGAAAATATTTGAATATGTT
GTACAGCAGGGTAGCTTACCTGGTATTGTAAGATTGAGCAGGGTTTGTAAATTATGGCAC
ACTGTCAGCTGTAGGCCGGAGTTGTGGAAGAATGTGGACCTTGCACAATATACTGTTGAA
AAATGTAAAACTGACTACAAACTGGTCTGGCTTCTCGAAAATCGTTTATCTCTTTGTCAC
AGTTTAAATATTGCTCAATGGAAGGTGTGTAATGTATCGTGGGTGTTAGCATGCGTGGTG
GACTACTGCCCCGGTCTGGTCGAGCTGAGTGTGGCTGGCTGGAGTCGTATCACACCAGAT
CAGCTGTTCGACCTTCTACAGGGACTCCCACAACTGCAACGACTAGATCTCTCTTTGACG
TCTGAGACTGGTGGTTCCAGTACTTGTCTCTCAGCAGCGTCTATGGCTCGCATCGCCAGC
AACTTCGGCGATCGTCTGACACACCTCACACTAGCTAACAATAAGTTCTCTGCTCTACCG
CAAATACTATCATCAGTGGCTGCTCACTGTCCGAATCTCGAAGTGTTAGATATATCAGGG
GCCTTGGCGACGTCACATCCGGCGCCCATACCCCTGGAGGCGTTGCAGAAAGGATGTCCT
AAAATGAGAGTCTTCAGAGCGGCGAACGCTCAGCTAGTACTGGCCTCAGCTACAACGTCA
CAACAGATGGAAGCCGGAGGTTGGAGTTTGCTTGAGGAGGTATCAGTGGCGTGTAGTGCT
GCTGAGGAAAGAACCGCGGTAGGCGAGTACCGGCTAGGAGACGAGGCCCTCGGCCGGCTA
GTGAGAGCTGCTACTAGATTAAGACTGCTGGACCTGCGAGGCCTGCAGCGACTCACCGAC
TCAGGTCTCGTGCGGGTGCCCGCATGGGACCTTCAGCATTTATTCCTAGGAGGTTGTAAT
GTGCTCCGTCAAACAAACGCGTGTCTGGAGTTGATCTGTGAGAAGTGGTCTCACAGTTTG
CTAGAATTGGACCTGTCGTGGGCGTCCGCCGCTAAGGTGCTCCACGACGCCGTGTGCGCA
CTCGCTGATGCACCAAGTAGCAAACTAAGAATACTCAATTTATGTGGATCATCGGTTTCT
TTTGAGGCCGTCAAAAAAGTGCTGTTAAAGTGTCCCCACCTAGAGTCTTTAAATCTAAGT
TCATGTCGGGCTTTGCCAAGAGGCATGAAACGTCTTTATACAGGAAAAGAACTTCAAGAC
CTGAAAGATAGTTTAGACCCGGAAAAAGTAAAGACCAAAGAGAACAAAAGTGAGGAATCA
AAGAAGAAGAAGACAAAGGCTGATTCAAAATGTGATGATAAAAAGGCTTCCCCTAAAGAC
GATACCTCCGAAAGTTCAGGTAGCAAAAGTGTTATAAAATCTACAGATAAGTCTTCCGCG
GGTGTATTTCAAGAACCGAAAAGTGTTTCCGATTCAGGCAATATGTCCGACAAACGTACG
TCTAACGATACACCAATTAAGTCTTCTCCTAGCAATAAGATTCTAGAACAGTCGAAAAAT
ATTTTAGAAAATGATACATCGTATCTACTTTCTAGAGGCTCGACCACTCCCAATTTGTCT
AGCCCCCTCGCTCAATCGAAGCCAGATTCTTCTTCGACTCCACGGTCGGAACCAACTAAG
TCTGATATAGGTAGTCCTCACTTTAGTCCAGTCCAAAAACCTGATAGTCAAGTCCCTAGT
AGTCCTGATATCCAACGTGATTCGGTTAAAAGTAACCACTCATGGAGTCTGGGACAGTTT
AAAAGCACACCCACTCAAAAGTCTGAGGCGAGTCCAATCAATCGGTTAGATAGTCATTCG
AAATTAAGACATAGCAAAATAGTAGAGCAATGTAGTCCAACAACTTCTTTAGAGAACAAG
CCGAGTCCGGAGACATTAGGTATGAAACATAAAGAGCAAGATATAAAACATCCTAATAAT
TGGAATTATGGTAGCTATAGCCCCATGCCACGACAGGACAGCCAGTTTTCATCTCAAAGG
AGTCCTTACTCAGCTCAACCGAGTCCTGCTCAGCCCAGTCCGTACTCGACCCAGCCCAGC
CCCTACTCCACACAGCCCAGTCCATATTCGTCTCAACCTAGCCCTTACTCTGCTCAACCG
AGCCCCGACACCAGTCAAATAGTTAAAGCGGAACACCAAAAGACGGGCGGGTGGAACACC
GGCAATTTTAGTCCAATGCCAAAACACCACGCGCCCTTCTCACCACATCCCTCCACACAC
ACCAGTCCAGATCCCGGCCTGGCCGTTAAAAATGATGGTCTTCGAAATAACCCTAACAAA
ACGCCCGGTCAGTATAGTCCAATGTCACGACAGCAACACCAGAGTCCATATTCACCTAGA
CCGAGTGTGGAAAATAACTACAACAACAAAAAAAGTCCGGGAGTAGGCAAGTACAGCCCT
ATGATGAGACCTGACTGTCATTTACCGAGCCCGGATGGAGGTCACGTCTCTCGACCGCAT
CTGAGTGGACGAACGCAGGATATGTACGGACGGCAAGTGTCCAAGGTCACCGAAGTTCCA
CAGAGTGTCCCACCGCCTGAAATACCGAACTCGTGGGGTTTCAACCACATGGGTACACCA
ACGTCCGCTATCGACTCTCTCGTCTGGGGGAGCGGTTCGTTCAACACGGAGCCGGCGCTG
CAGTCGCCCATGTCCCAGTCGCGCGACAACGTGTCCACGATGCTCAACACGCCGCCTCCC
CAACCTTGGAACGACCTAACCCCTTTCGATAGCACTCTACGAAGGTCCACCGACCCTAGT
GACCCATGGACGTTCGGACAGTTCCGAGTGGAGCCACCGAATCAATTGCACAATACTTTC
GTAGAGCAAACCGTGAGCTTCGATTCTTTGAGTGGCCATCTTGGTCATCCGTCGCATACG
CTCCAGAGTTACTTGGAGGATAGCTTCTCTGAGCCTTCGCGAGTGGACTGA
Protein sequence:
MSGRSSPVNGGYDAAEPAMRLSVRKDLFPEIRLLKGTSVSDTESETAQDELEAVSCVKLE
TDFEKSIDDIAQQKMQVVNGALPSPTRPRHRKHKQHSKRDSDYTTHNGCPPKEKKRKKSS
HDSRKWTPSKNSIVTKVKGGKNLNLVSSSEYQDDDEGEVEEDESDSSEDEVLKSSVKLPL
ISRQSGKPYSHELSQLSTKKSKSKESSKEQRTRIVIPCSGKPRSMLGFCSSRSKKKSKKS
EVTPPTYQSQIVDTSTKLKIKIRRTSIQDVITPAPVSIADIGQRRSKKKRAVSPAASASS
GEEYDPTRGDTAAVMSVAATKSRQPRAKVKKSNNNNSKTKDKAQKTERTRGSAVDKGSKP
QSPWAHSMPEELLVKIFEYVVQQGSLPGIVRLSRVCKLWHTVSCRPELWKNVDLAQYTVE
KCKTDYKLVWLLENRLSLCHSLNIAQWKVCNVSWVLACVVDYCPGLVELSVAGWSRITPD
QLFDLLQGLPQLQRLDLSLTSETGGSSTCLSAASMARIASNFGDRLTHLTLANNKFSALP
QILSSVAAHCPNLEVLDISGALATSHPAPIPLEALQKGCPKMRVFRAANAQLVLASATTS
QQMEAGGWSLLEEVSVACSAAEERTAVGEYRLGDEALGRLVRAATRLRLLDLRGLQRLTD
SGLVRVPAWDLQHLFLGGCNVLRQTNACLELICEKWSHSLLELDLSWASAAKVLHDAVCA
LADAPSSKLRILNLCGSSVSFEAVKKVLLKCPHLESLNLSSCRALPRGMKRLYTGKELQD
LKDSLDPEKVKTKENKSEESKKKKTKADSKCDDKKASPKDDTSESSGSKSVIKSTDKSSA
GVFQEPKSVSDSGNMSDKRTSNDTPIKSSPSNKILEQSKNILENDTSYLLSRGSTTPNLS
SPLAQSKPDSSSTPRSEPTKSDIGSPHFSPVQKPDSQVPSSPDIQRDSVKSNHSWSLGQF
KSTPTQKSEASPINRLDSHSKLRHSKIVEQCSPTTSLENKPSPETLGMKHKEQDIKHPNN
WNYGSYSPMPRQDSQFSSQRSPYSAQPSPAQPSPYSTQPSPYSTQPSPYSSQPSPYSAQP
SPDTSQIVKAEHQKTGGWNTGNFSPMPKHHAPFSPHPSTHTSPDPGLAVKNDGLRNNPNK
TPGQYSPMSRQQHQSPYSPRPSVENNYNNKKSPGVGKYSPMMRPDCHLPSPDGGHVSRPH
LSGRTQDMYGRQVSKVTEVPQSVPPPEIPNSWGFNHMGTPTSAIDSLVWGSGSFNTEPAL
QSPMSQSRDNVSTMLNTPPPQPWNDLTPFDSTLRRSTDPSDPWTFGQFRVEPPNQLHNTF
VEQTVSFDSLSGHLGHPSHTLQSYLEDSFSEPSRVD